Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.6■□□□□ 0.41
Clcn6O35454 Gm9916-201ENSMUST00000192943 1228 ntBASIC17.6■□□□□ 0.41
Clcn6O35454 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn6O35454 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Clcn6O35454 Gm37891-201ENSMUST00000195585 1326 ntBASIC17.6■□□□□ 0.41
Clcn6O35454 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Clcn6O35454 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.6■□□□□ 0.41
Clcn6O35454 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Clcn6O35454 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn6O35454 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Clcn6O35454 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn6O35454 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Clcn6O35454 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn6O35454 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn6O35454 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn6O35454 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn6O35454 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn6O35454 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Clcn6O35454 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn6O35454 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn6O35454 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn6O35454 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn6O35454 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn6O35454 Gm5277-201ENSMUST00000164923 556 ntBASIC17.59■□□□□ 0.41
Clcn6O35454 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn6O35454 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn6O35454 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.59■□□□□ 0.41
Clcn6O35454 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC17.59■□□□□ 0.41
Clcn6O35454 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn6O35454 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn6O35454 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn6O35454 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.59■□□□□ 0.41
Clcn6O35454 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn6O35454 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Clcn6O35454 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn6O35454 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn6O35454 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn6O35454 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn6O35454 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn6O35454 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn6O35454 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn6O35454 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn6O35454 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Clcn6O35454 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.41
Clcn6O35454 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clcn6O35454 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.58■□□□□ 0.41
Clcn6O35454 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Clcn6O35454 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.58■□□□□ 0.41
Clcn6O35454 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clcn6O35454 AC136019.1-201ENSMUST00000226503 1412 ntBASIC17.58■□□□□ 0.41
Clcn6O35454 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Clcn6O35454 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn6O35454 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.58■□□□□ 0.4
Clcn6O35454 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.58■□□□□ 0.4
Clcn6O35454 Gm18692-201ENSMUST00000193047 511 ntBASIC17.58■□□□□ 0.4
Clcn6O35454 AC154843.1-201ENSMUST00000226897 1138 ntBASIC17.58■□□□□ 0.4
Clcn6O35454 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn6O35454 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn6O35454 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn6O35454 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn6O35454 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn6O35454 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn6O35454 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn6O35454 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.57■□□□□ 0.4
Clcn6O35454 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn6O35454 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn6O35454 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn6O35454 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn6O35454 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.57■□□□□ 0.4
Clcn6O35454 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn6O35454 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Clcn6O35454 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn6O35454 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn6O35454 Gm25109-201ENSMUST00000122474 114 ntBASIC17.57■□□□□ 0.4
Clcn6O35454 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC17.57■□□□□ 0.4
Clcn6O35454 Mir6349-201ENSMUST00000184059 97 ntBASIC17.57■□□□□ 0.4
Clcn6O35454 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.57■□□□□ 0.4
Clcn6O35454 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.57■□□□□ 0.4
Clcn6O35454 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn6O35454 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn6O35454 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn6O35454 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn6O35454 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn6O35454 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn6O35454 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn6O35454 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Clcn6O35454 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn6O35454 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn6O35454 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Clcn6O35454 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Clcn6O35454 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcn6O35454 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcn6O35454 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Clcn6O35454 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
Clcn6O35454 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcn6O35454 Gm13401-201ENSMUST00000117074 291 ntBASIC17.56■□□□□ 0.4
Clcn6O35454 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.56■□□□□ 0.4
Clcn6O35454 CT025525.1-201ENSMUST00000226325 1054 ntBASIC17.56■□□□□ 0.4
Clcn6O35454 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Clcn6O35454 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms