Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC20.2■□□□□ 0.82
Dctn1O08788 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC20.2■□□□□ 0.82
Dctn1O08788 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Dctn1O08788 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Dctn1O08788 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Dctn1O08788 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Dctn1O08788 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Dctn1O08788 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Dctn1O08788 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Dctn1O08788 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Dctn1O08788 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Dctn1O08788 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Dctn1O08788 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Dctn1O08788 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Dctn1O08788 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Dctn1O08788 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Dctn1O08788 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC20.19■□□□□ 0.82
Dctn1O08788 Gm7230-201ENSMUST00000173026 815 ntBASIC20.19■□□□□ 0.82
Dctn1O08788 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC20.19■□□□□ 0.82
Dctn1O08788 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Dctn1O08788 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Dctn1O08788 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.19■□□□□ 0.82
Dctn1O08788 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Dctn1O08788 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Dctn1O08788 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dctn1O08788 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dctn1O08788 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dctn1O08788 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dctn1O08788 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dctn1O08788 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC20.18■□□□□ 0.82
Dctn1O08788 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Dctn1O08788 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Dctn1O08788 Gm37584-201ENSMUST00000193595 1290 ntBASIC20.18■□□□□ 0.82
Dctn1O08788 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Dctn1O08788 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Dctn1O08788 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dctn1O08788 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dctn1O08788 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dctn1O08788 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dctn1O08788 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Dctn1O08788 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Dctn1O08788 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Dctn1O08788 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Dctn1O08788 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Dctn1O08788 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Dctn1O08788 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Dctn1O08788 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Dctn1O08788 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Dctn1O08788 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC20.17■□□□□ 0.82
Dctn1O08788 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC20.17■□□□□ 0.82
Dctn1O08788 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC20.17■□□□□ 0.82
Dctn1O08788 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC20.17■□□□□ 0.82
Dctn1O08788 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Dctn1O08788 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Dctn1O08788 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Dctn1O08788 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Dctn1O08788 AC159093.1-201ENSMUST00000227779 380 ntBASIC20.17■□□□□ 0.82
Dctn1O08788 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Dctn1O08788 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Dctn1O08788 Gm15590-201ENSMUST00000078419 552 ntBASIC20.17■□□□□ 0.82
Dctn1O08788 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Dctn1O08788 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Dctn1O08788 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Dctn1O08788 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Dctn1O08788 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Dctn1O08788 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Dctn1O08788 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Dctn1O08788 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Dctn1O08788 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Dctn1O08788 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Dctn1O08788 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Dctn1O08788 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Dctn1O08788 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Dctn1O08788 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Dctn1O08788 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC20.16■□□□□ 0.82
Dctn1O08788 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Dctn1O08788 Gm5264-201ENSMUST00000190584 848 ntBASIC20.16■□□□□ 0.82
Dctn1O08788 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC20.16■□□□□ 0.82
Dctn1O08788 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC20.16■□□□□ 0.82
Dctn1O08788 Psmb5-202ENSMUST00000227257 622 ntBASIC20.16■□□□□ 0.82
Dctn1O08788 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Dctn1O08788 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Dctn1O08788 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Dctn1O08788 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Dctn1O08788 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Dctn1O08788 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Dctn1O08788 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Dctn1O08788 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Dctn1O08788 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Dctn1O08788 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Dctn1O08788 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.16■□□□□ 0.82
Dctn1O08788 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Dctn1O08788 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Dctn1O08788 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Dctn1O08788 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Dctn1O08788 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Dctn1O08788 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Dctn1O08788 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC20.15■□□□□ 0.82
Dctn1O08788 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Dctn1O08788 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms