Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tcof1O08784 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Tcof1O08784 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tcof1O08784 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tcof1O08784 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tcof1O08784 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tcof1O08784 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tcof1O08784 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tcof1O08784 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tcof1O08784 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tcof1O08784 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tcof1O08784 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tcof1O08784 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tcof1O08784 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tcof1O08784 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tcof1O08784 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.17■□□□□ 0.66
Tcof1O08784 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tcof1O08784 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tcof1O08784 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tcof1O08784 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tcof1O08784 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tcof1O08784 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tcof1O08784 Gm10052-201ENSMUST00000168019 960 ntBASIC19.17■□□□□ 0.66
Tcof1O08784 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tcof1O08784 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tcof1O08784 Gm7729-201ENSMUST00000050143 801 ntBASIC19.17■□□□□ 0.66
Tcof1O08784 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tcof1O08784 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tcof1O08784 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tcof1O08784 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tcof1O08784 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tcof1O08784 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Tcof1O08784 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Tcof1O08784 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tcof1O08784 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tcof1O08784 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tcof1O08784 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Tcof1O08784 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tcof1O08784 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tcof1O08784 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tcof1O08784 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Tcof1O08784 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.16■□□□□ 0.66
Tcof1O08784 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.16■□□□□ 0.66
Tcof1O08784 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.16■□□□□ 0.66
Tcof1O08784 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Tcof1O08784 Gm44430-201ENSMUST00000203376 995 ntBASIC19.16■□□□□ 0.66
Tcof1O08784 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tcof1O08784 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tcof1O08784 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tcof1O08784 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tcof1O08784 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tcof1O08784 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tcof1O08784 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tcof1O08784 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tcof1O08784 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tcof1O08784 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tcof1O08784 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tcof1O08784 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tcof1O08784 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tcof1O08784 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.15■□□□□ 0.66
Tcof1O08784 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Tcof1O08784 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.15■□□□□ 0.66
Tcof1O08784 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.15■□□□□ 0.66
Tcof1O08784 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tcof1O08784 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.15■□□□□ 0.66
Tcof1O08784 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.15■□□□□ 0.66
Tcof1O08784 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tcof1O08784 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tcof1O08784 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Tcof1O08784 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.15■□□□□ 0.66
Tcof1O08784 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Tcof1O08784 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.14■□□□□ 0.66
Tcof1O08784 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
Tcof1O08784 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tcof1O08784 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tcof1O08784 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tcof1O08784 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Tcof1O08784 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tcof1O08784 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tcof1O08784 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.14■□□□□ 0.65
Tcof1O08784 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tcof1O08784 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tcof1O08784 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tcof1O08784 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Tcof1O08784 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tcof1O08784 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tcof1O08784 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tcof1O08784 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tcof1O08784 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Tcof1O08784 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tcof1O08784 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Tcof1O08784 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Tcof1O08784 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tcof1O08784 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Tcof1O08784 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Tcof1O08784 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tcof1O08784 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tcof1O08784 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.13■□□□□ 0.65
Tcof1O08784 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Tcof1O08784 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms