Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Polr2jO08740 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Polr2jO08740 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Polr2jO08740 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Polr2jO08740 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
Polr2jO08740 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Polr2jO08740 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Polr2jO08740 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Polr2jO08740 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Polr2jO08740 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Polr2jO08740 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Polr2jO08740 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Polr2jO08740 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Polr2jO08740 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Polr2jO08740 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Polr2jO08740 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Polr2jO08740 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Polr2jO08740 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Polr2jO08740 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Polr2jO08740 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Polr2jO08740 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Polr2jO08740 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.76■□□□□ 0.11
Polr2jO08740 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Polr2jO08740 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Polr2jO08740 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Polr2jO08740 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Polr2jO08740 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Polr2jO08740 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Polr2jO08740 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Polr2jO08740 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Polr2jO08740 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Polr2jO08740 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Polr2jO08740 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Polr2jO08740 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Polr2jO08740 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Polr2jO08740 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Polr2jO08740 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Polr2jO08740 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Polr2jO08740 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Polr2jO08740 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.75■□□□□ 0.11
Polr2jO08740 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Polr2jO08740 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Polr2jO08740 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Polr2jO08740 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Polr2jO08740 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.75■□□□□ 0.11
Polr2jO08740 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Polr2jO08740 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Polr2jO08740 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.75■□□□□ 0.11
Polr2jO08740 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Polr2jO08740 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Polr2jO08740 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Polr2jO08740 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Polr2jO08740 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Polr2jO08740 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Polr2jO08740 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Polr2jO08740 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Polr2jO08740 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Polr2jO08740 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Polr2jO08740 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Polr2jO08740 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.74■□□□□ 0.11
Polr2jO08740 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Polr2jO08740 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.74■□□□□ 0.11
Polr2jO08740 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Polr2jO08740 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Polr2jO08740 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Polr2jO08740 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.74■□□□□ 0.11
Polr2jO08740 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Polr2jO08740 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Polr2jO08740 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Polr2jO08740 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Polr2jO08740 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Polr2jO08740 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Polr2jO08740 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Polr2jO08740 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.74■□□□□ 0.11
Polr2jO08740 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Polr2jO08740 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Polr2jO08740 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Polr2jO08740 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Polr2jO08740 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Polr2jO08740 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Polr2jO08740 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Polr2jO08740 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Polr2jO08740 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Polr2jO08740 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Polr2jO08740 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.73■□□□□ 0.11
Polr2jO08740 Mir1199-201ENSMUST00000117015 119 ntBASIC15.73■□□□□ 0.11
Polr2jO08740 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Polr2jO08740 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.73■□□□□ 0.11
Polr2jO08740 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.73■□□□□ 0.11
Polr2jO08740 Timm23-208ENSMUST00000226683 750 ntBASIC15.73■□□□□ 0.11
Polr2jO08740 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Polr2jO08740 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Polr2jO08740 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Polr2jO08740 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Polr2jO08740 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Polr2jO08740 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Polr2jO08740 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Polr2jO08740 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Polr2jO08740 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.73■□□□□ 0.11
Polr2jO08740 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms