Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm10553J3QPF1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm10553J3QPF1 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.56□□□□□ -0.4
Gm10553J3QPF1 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm10553J3QPF1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm10553J3QPF1 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm10553J3QPF1 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm10553J3QPF1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Gm10553J3QPF1 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Gm10553J3QPF1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm10553J3QPF1 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm10553J3QPF1 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Gm10553J3QPF1 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.56□□□□□ -0.4
Gm10553J3QPF1 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm10553J3QPF1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
Gm10553J3QPF1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Gm19439-201ENSMUST00000198195 2273 ntBASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Gm14859-201ENSMUST00000117752 357 ntBASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Gm27704-201ENSMUST00000185094 107 ntBASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm10553J3QPF1 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm10553J3QPF1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
Gm10553J3QPF1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Gm10553J3QPF1 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Gm10553J3QPF1 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gm10553J3QPF1 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm10553J3QPF1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Gm10553J3QPF1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm10553J3QPF1 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm10553J3QPF1 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm10553J3QPF1 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm10553J3QPF1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.54□□□□□ -0.4
Gm10553J3QPF1 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gm10553J3QPF1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Gm10553J3QPF1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm10553J3QPF1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm10553J3QPF1 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm10553J3QPF1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm10553J3QPF1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm10553J3QPF1 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm10553J3QPF1 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gm10553J3QPF1 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm10553J3QPF1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm10553J3QPF1 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Gm10553J3QPF1 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm10553J3QPF1 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm10553J3QPF1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm10553J3QPF1 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Gm10553J3QPF1 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm10553J3QPF1 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm10553J3QPF1 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Gm10553J3QPF1 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm10553J3QPF1 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm10553J3QPF1 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.53□□□□□ -0.4
Gm10553J3QPF1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm10553J3QPF1 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm10553J3QPF1 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm10553J3QPF1 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm10553J3QPF1 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm10553J3QPF1 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm10553J3QPF1 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm10553J3QPF1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Gm10553J3QPF1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Gm10553J3QPF1 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm10553J3QPF1 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm10553J3QPF1 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms