Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm11236J3QMS7 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm11236J3QMS7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11236J3QMS7 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11236J3QMS7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11236J3QMS7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11236J3QMS7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.12■□□□□ 0.33
Gm11236J3QMS7 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11236J3QMS7 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Gm11236J3QMS7 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Gm11236J3QMS7 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.12■□□□□ 0.33
Gm11236J3QMS7 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11236J3QMS7 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11236J3QMS7 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11236J3QMS7 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.12■□□□□ 0.33
Gm11236J3QMS7 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11236J3QMS7 Gm37935-201ENSMUST00000192012 982 ntBASIC17.12■□□□□ 0.33
Gm11236J3QMS7 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.12■□□□□ 0.33
Gm11236J3QMS7 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.12■□□□□ 0.33
Gm11236J3QMS7 Gm5364-201ENSMUST00000216789 889 ntBASIC17.12■□□□□ 0.33
Gm11236J3QMS7 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.12■□□□□ 0.33
Gm11236J3QMS7 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.12■□□□□ 0.33
Gm11236J3QMS7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Gm11236J3QMS7 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.12■□□□□ 0.33
Gm11236J3QMS7 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11236J3QMS7 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11236J3QMS7 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Gm11236J3QMS7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11236J3QMS7 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11236J3QMS7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Gm11236J3QMS7 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11236J3QMS7 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Gm11236J3QMS7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11236J3QMS7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11236J3QMS7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Gm11236J3QMS7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11236J3QMS7 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11236J3QMS7 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11236J3QMS7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11236J3QMS7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11236J3QMS7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Gm11236J3QMS7 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.11■□□□□ 0.33
Gm11236J3QMS7 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.11■□□□□ 0.33
Gm11236J3QMS7 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.11■□□□□ 0.33
Gm11236J3QMS7 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11236J3QMS7 AV026068-213ENSMUST00000223675 1171 ntBASIC17.11■□□□□ 0.33
Gm11236J3QMS7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.11■□□□□ 0.33
Gm11236J3QMS7 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11236J3QMS7 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.11■□□□□ 0.33
Gm11236J3QMS7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11236J3QMS7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11236J3QMS7 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11236J3QMS7 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11236J3QMS7 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11236J3QMS7 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11236J3QMS7 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.1■□□□□ 0.33
Gm11236J3QMS7 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.1■□□□□ 0.33
Gm11236J3QMS7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.1■□□□□ 0.33
Gm11236J3QMS7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11236J3QMS7 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.1■□□□□ 0.33
Gm11236J3QMS7 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11236J3QMS7 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.1■□□□□ 0.33
Gm11236J3QMS7 Psmb5-202ENSMUST00000227257 622 ntBASIC17.1■□□□□ 0.33
Gm11236J3QMS7 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11236J3QMS7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gm11236J3QMS7 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11236J3QMS7 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11236J3QMS7 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11236J3QMS7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11236J3QMS7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.09■□□□□ 0.33
Gm11236J3QMS7 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11236J3QMS7 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
Gm11236J3QMS7 Gm15173-201ENSMUST00000122049 433 ntBASIC17.09■□□□□ 0.33
Gm11236J3QMS7 Gm6550-201ENSMUST00000187574 993 ntBASIC17.09■□□□□ 0.33
Gm11236J3QMS7 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.09■□□□□ 0.33
Gm11236J3QMS7 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Gm11236J3QMS7 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11236J3QMS7 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11236J3QMS7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11236J3QMS7 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11236J3QMS7 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11236J3QMS7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
Gm11236J3QMS7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm11236J3QMS7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Gm11236J3QMS7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm11236J3QMS7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm11236J3QMS7 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm11236J3QMS7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm11236J3QMS7 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.08■□□□□ 0.32
Gm11236J3QMS7 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm11236J3QMS7 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Gm11236J3QMS7 Gm8000-201ENSMUST00000188378 592 ntBASIC17.08■□□□□ 0.32
Gm11236J3QMS7 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm11236J3QMS7 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm11236J3QMS7 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm11236J3QMS7 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Gm11236J3QMS7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Gm11236J3QMS7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.08■□□□□ 0.32
Gm11236J3QMS7 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm11236J3QMS7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms