Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-1G3UXB3 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-1G3UXB3 Gm45909-201ENSMUST00000212413 1031 ntBASIC18.75■□□□□ 0.59
Nkx1-1G3UXB3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC18.75■□□□□ 0.59
Nkx1-1G3UXB3 Gm8655-201ENSMUST00000221159 852 ntBASIC18.75■□□□□ 0.59
Nkx1-1G3UXB3 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-1G3UXB3 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-1G3UXB3 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Nkx1-1G3UXB3 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-1G3UXB3 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-1G3UXB3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Nkx1-1G3UXB3 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.75■□□□□ 0.59
Nkx1-1G3UXB3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-1G3UXB3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-1G3UXB3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Nkx1-1G3UXB3 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx1-1G3UXB3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx1-1G3UXB3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx1-1G3UXB3 Gm12497-201ENSMUST00000138778 237 ntBASIC18.74■□□□□ 0.59
Nkx1-1G3UXB3 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC18.74■□□□□ 0.59
Nkx1-1G3UXB3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.74■□□□□ 0.59
Nkx1-1G3UXB3 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx1-1G3UXB3 Gm27216-202ENSMUST00000184100 635 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx1-1G3UXB3 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx1-1G3UXB3 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.74■□□□□ 0.59
Nkx1-1G3UXB3 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx1-1G3UXB3 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx1-1G3UXB3 AC153932.1-201ENSMUST00000218558 787 ntBASIC18.74■□□□□ 0.59
Nkx1-1G3UXB3 AC132467.2-202ENSMUST00000227726 559 ntBASIC18.74■□□□□ 0.59
Nkx1-1G3UXB3 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx1-1G3UXB3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Nkx1-1G3UXB3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Nkx1-1G3UXB3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx1-1G3UXB3 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx1-1G3UXB3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx1-1G3UXB3 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx1-1G3UXB3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.74■□□□□ 0.59
Nkx1-1G3UXB3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.74■□□□□ 0.59
Nkx1-1G3UXB3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx1-1G3UXB3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx1-1G3UXB3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx1-1G3UXB3 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC18.73■□□□□ 0.59
Nkx1-1G3UXB3 Gm22175-201ENSMUST00000175007 78 ntBASIC18.73■□□□□ 0.59
Nkx1-1G3UXB3 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx1-1G3UXB3 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx1-1G3UXB3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx1-1G3UXB3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx1-1G3UXB3 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Nkx1-1G3UXB3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx1-1G3UXB3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx1-1G3UXB3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx1-1G3UXB3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx1-1G3UXB3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.72■□□□□ 0.59
Nkx1-1G3UXB3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx1-1G3UXB3 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx1-1G3UXB3 Gm11637-201ENSMUST00000120601 592 ntBASIC18.72■□□□□ 0.59
Nkx1-1G3UXB3 Gm12001-201ENSMUST00000121727 913 ntBASIC18.72■□□□□ 0.59
Nkx1-1G3UXB3 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx1-1G3UXB3 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC18.72■□□□□ 0.59
Nkx1-1G3UXB3 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Nkx1-1G3UXB3 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Nkx1-1G3UXB3 Gm27622-201ENSMUST00000183779 60 ntBASIC18.72■□□□□ 0.59
Nkx1-1G3UXB3 Gm44492-201ENSMUST00000197012 141 ntBASIC18.72■□□□□ 0.59
Nkx1-1G3UXB3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.72■□□□□ 0.59
Nkx1-1G3UXB3 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx1-1G3UXB3 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx1-1G3UXB3 AC153801.1-201ENSMUST00000217904 947 ntBASIC18.72■□□□□ 0.59
Nkx1-1G3UXB3 AC163038.1-201ENSMUST00000223632 1142 ntBASIC18.72■□□□□ 0.59
Nkx1-1G3UXB3 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx1-1G3UXB3 Tprkb-202ENSMUST00000089570 1216 ntTSL 5 BASIC18.72■□□□□ 0.59
Nkx1-1G3UXB3 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx1-1G3UXB3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx1-1G3UXB3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx1-1G3UXB3 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx1-1G3UXB3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx1-1G3UXB3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx1-1G3UXB3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx1-1G3UXB3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx1-1G3UXB3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx1-1G3UXB3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx1-1G3UXB3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Nkx1-1G3UXB3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx1-1G3UXB3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx1-1G3UXB3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx1-1G3UXB3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx1-1G3UXB3 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC18.71■□□□□ 0.59
Nkx1-1G3UXB3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.71■□□□□ 0.59
Nkx1-1G3UXB3 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx1-1G3UXB3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Nkx1-1G3UXB3 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC18.71■□□□□ 0.59
Nkx1-1G3UXB3 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC18.71■□□□□ 0.59
Nkx1-1G3UXB3 Gm4459-201ENSMUST00000118750 468 ntBASIC18.71■□□□□ 0.59
Nkx1-1G3UXB3 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx1-1G3UXB3 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC18.71■□□□□ 0.59
Nkx1-1G3UXB3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.71■□□□□ 0.59
Nkx1-1G3UXB3 Gm28923-201ENSMUST00000187755 322 ntBASIC18.71■□□□□ 0.59
Nkx1-1G3UXB3 Gm44450-201ENSMUST00000199528 114 ntBASIC18.71■□□□□ 0.59
Nkx1-1G3UXB3 Gm43550-201ENSMUST00000200597 303 ntBASIC18.71■□□□□ 0.59
Nkx1-1G3UXB3 AC134439.1-201ENSMUST00000220923 600 ntBASIC18.71■□□□□ 0.59
Nkx1-1G3UXB3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 269.3 ms