Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Ccdc85cE9Q6B2 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc85cE9Q6B2 AC140397.2-201ENSMUST00000224213 834 ntBASIC20.19■□□□□ 0.82
Ccdc85cE9Q6B2 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc85cE9Q6B2 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc85cE9Q6B2 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc85cE9Q6B2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc85cE9Q6B2 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC20.19■□□□□ 0.82
Ccdc85cE9Q6B2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc85cE9Q6B2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.19■□□□□ 0.82
Ccdc85cE9Q6B2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc85cE9Q6B2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc85cE9Q6B2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc85cE9Q6B2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.19■□□□□ 0.82
Ccdc85cE9Q6B2 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc85cE9Q6B2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc85cE9Q6B2 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC20.18■□□□□ 0.82
Ccdc85cE9Q6B2 Gm5866-201ENSMUST00000177881 973 ntBASIC20.18■□□□□ 0.82
Ccdc85cE9Q6B2 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc85cE9Q6B2 AC125206.2-201ENSMUST00000217454 574 ntBASIC20.18■□□□□ 0.82
Ccdc85cE9Q6B2 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC20.18■□□□□ 0.82
Ccdc85cE9Q6B2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Ccdc85cE9Q6B2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc85cE9Q6B2 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc85cE9Q6B2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Ccdc85cE9Q6B2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ccdc85cE9Q6B2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc85cE9Q6B2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc85cE9Q6B2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc85cE9Q6B2 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc85cE9Q6B2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc85cE9Q6B2 Nrn1-204ENSMUST00000224323 1779 ntBASIC20.17■□□□□ 0.82
Ccdc85cE9Q6B2 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc85cE9Q6B2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC20.17■□□□□ 0.82
Ccdc85cE9Q6B2 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc85cE9Q6B2 H2-Pa-201ENSMUST00000182803 626 ntBASIC20.17■□□□□ 0.82
Ccdc85cE9Q6B2 Gm27437-201ENSMUST00000183429 107 ntBASIC20.17■□□□□ 0.82
Ccdc85cE9Q6B2 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc85cE9Q6B2 Gm43474-201ENSMUST00000196415 774 ntBASIC20.17■□□□□ 0.82
Ccdc85cE9Q6B2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC20.17■□□□□ 0.82
Ccdc85cE9Q6B2 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Ccdc85cE9Q6B2 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC20.17■□□□□ 0.82
Ccdc85cE9Q6B2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc85cE9Q6B2 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc85cE9Q6B2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Ccdc85cE9Q6B2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Ccdc85cE9Q6B2 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc85cE9Q6B2 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc85cE9Q6B2 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc85cE9Q6B2 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Ccdc85cE9Q6B2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Ccdc85cE9Q6B2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc85cE9Q6B2 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc85cE9Q6B2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc85cE9Q6B2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc85cE9Q6B2 Gm11745-201ENSMUST00000121669 448 ntBASIC20.16■□□□□ 0.82
Ccdc85cE9Q6B2 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC20.16■□□□□ 0.82
Ccdc85cE9Q6B2 Gm27622-201ENSMUST00000183779 60 ntBASIC20.16■□□□□ 0.82
Ccdc85cE9Q6B2 Gm37153-201ENSMUST00000193637 231 ntBASIC20.16■□□□□ 0.82
Ccdc85cE9Q6B2 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc85cE9Q6B2 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Ccdc85cE9Q6B2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc85cE9Q6B2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Ccdc85cE9Q6B2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc85cE9Q6B2 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc85cE9Q6B2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc85cE9Q6B2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc85cE9Q6B2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc85cE9Q6B2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Ccdc85cE9Q6B2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc85cE9Q6B2 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc85cE9Q6B2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc85cE9Q6B2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc85cE9Q6B2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc85cE9Q6B2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.15■□□□□ 0.82
Ccdc85cE9Q6B2 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
Ccdc85cE9Q6B2 Gm2308-201ENSMUST00000166539 1004 ntBASIC20.15■□□□□ 0.82
Ccdc85cE9Q6B2 Mir6990-201ENSMUST00000183724 91 ntBASIC20.15■□□□□ 0.82
Ccdc85cE9Q6B2 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc85cE9Q6B2 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc85cE9Q6B2 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc85cE9Q6B2 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc85cE9Q6B2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc85cE9Q6B2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc85cE9Q6B2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Ccdc85cE9Q6B2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Ccdc85cE9Q6B2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Ccdc85cE9Q6B2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.14■□□□□ 0.82
Ccdc85cE9Q6B2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ccdc85cE9Q6B2 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc85cE9Q6B2 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC20.14■□□□□ 0.81
Ccdc85cE9Q6B2 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Ccdc85cE9Q6B2 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Ccdc85cE9Q6B2 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC20.14■□□□□ 0.81
Ccdc85cE9Q6B2 Gm13597-201ENSMUST00000121239 375 ntBASIC20.14■□□□□ 0.81
Ccdc85cE9Q6B2 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc85cE9Q6B2 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Ccdc85cE9Q6B2 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC20.14■□□□□ 0.81
Ccdc85cE9Q6B2 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc85cE9Q6B2 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms