Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc1E9PZP8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Herc1E9PZP8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc1E9PZP8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc1E9PZP8 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc1E9PZP8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Herc1E9PZP8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Herc1E9PZP8 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC9.19□□□□□ -0.94
Herc1E9PZP8 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Herc1E9PZP8 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc1E9PZP8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc1E9PZP8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc1E9PZP8 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc1E9PZP8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc1E9PZP8 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc1E9PZP8 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC9.18□□□□□ -0.94
Herc1E9PZP8 Gm18056-201ENSMUST00000207670 568 ntBASIC9.18□□□□□ -0.94
Herc1E9PZP8 Gm18061-201ENSMUST00000208350 562 ntBASIC9.18□□□□□ -0.94
Herc1E9PZP8 Gm18063-201ENSMUST00000208529 568 ntBASIC9.18□□□□□ -0.94
Herc1E9PZP8 Gm18052-201ENSMUST00000208750 559 ntBASIC9.18□□□□□ -0.94
Herc1E9PZP8 Gm6218-201ENSMUST00000219812 628 ntBASIC9.18□□□□□ -0.94
Herc1E9PZP8 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc1E9PZP8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc1E9PZP8 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc1E9PZP8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc1E9PZP8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
Herc1E9PZP8 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC9.18□□□□□ -0.94
Herc1E9PZP8 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc1E9PZP8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc1E9PZP8 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc1E9PZP8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc1E9PZP8 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC9.18□□□□□ -0.94
Herc1E9PZP8 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC9.18□□□□□ -0.94
Herc1E9PZP8 Gm7172-201ENSMUST00000218047 1152 ntBASIC9.18□□□□□ -0.94
Herc1E9PZP8 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Herc1E9PZP8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc1E9PZP8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc1E9PZP8 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc1E9PZP8 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Herc1E9PZP8 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc1E9PZP8 Mir7036b-201ENSMUST00000184791 63 ntBASIC9.18□□□□□ -0.94
Herc1E9PZP8 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Herc1E9PZP8 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC9.18□□□□□ -0.94
Herc1E9PZP8 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc1E9PZP8 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Herc1E9PZP8 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Herc1E9PZP8 Olfr582-201ENSMUST00000098212 960 ntBASIC9.18□□□□□ -0.94
Herc1E9PZP8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc1E9PZP8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Herc1E9PZP8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc1E9PZP8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc1E9PZP8 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc1E9PZP8 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc1E9PZP8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC9.17□□□□□ -0.94
Herc1E9PZP8 Gm13517-201ENSMUST00000120782 1495 ntBASIC9.17□□□□□ -0.94
Herc1E9PZP8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc1E9PZP8 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc1E9PZP8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC9.17□□□□□ -0.94
Herc1E9PZP8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc1E9PZP8 Gm13226-201ENSMUST00000117838 404 ntBASIC9.17□□□□□ -0.94
Herc1E9PZP8 Gm25144-201ENSMUST00000179561 110 ntBASIC9.17□□□□□ -0.94
Herc1E9PZP8 Gm25352-201ENSMUST00000179815 110 ntBASIC9.17□□□□□ -0.94
Herc1E9PZP8 AC119177.1-201ENSMUST00000227647 1332 ntBASIC9.17□□□□□ -0.94
Herc1E9PZP8 Gm38318-201ENSMUST00000195769 1706 ntBASIC9.17□□□□□ -0.94
Herc1E9PZP8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc1E9PZP8 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc1E9PZP8 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc1E9PZP8 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC9.17□□□□□ -0.94
Herc1E9PZP8 Rpph1-201ENSMUST00000175096 319 ntBASIC9.17□□□□□ -0.94
Herc1E9PZP8 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC9.17□□□□□ -0.94
Herc1E9PZP8 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC9.17□□□□□ -0.94
Herc1E9PZP8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc1E9PZP8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc1E9PZP8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc1E9PZP8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Herc1E9PZP8 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc1E9PZP8 Gm25406-201ENSMUST00000157599 105 ntBASIC9.17□□□□□ -0.94
Herc1E9PZP8 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC9.17□□□□□ -0.94
Herc1E9PZP8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc1E9PZP8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc1E9PZP8 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc1E9PZP8 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC9.17□□□□□ -0.94
Herc1E9PZP8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc1E9PZP8 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Herc1E9PZP8 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc1E9PZP8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc1E9PZP8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Herc1E9PZP8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc1E9PZP8 Idnk-204ENSMUST00000226010 1898 ntBASIC9.16□□□□□ -0.94
Herc1E9PZP8 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Herc1E9PZP8 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC9.16□□□□□ -0.94
Herc1E9PZP8 Zfp264-201ENSMUST00000208656 1563 ntBASIC9.16□□□□□ -0.94
Herc1E9PZP8 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc1E9PZP8 Gm22902-201ENSMUST00000158488 302 ntBASIC9.16□□□□□ -0.94
Herc1E9PZP8 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Herc1E9PZP8 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc1E9PZP8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc1E9PZP8 Gm6018-201ENSMUST00000216090 1306 ntBASIC9.16□□□□□ -0.94
Herc1E9PZP8 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc1E9PZP8 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms