Protein–RNA interactions for Protein: E9PYU5

Gm44503, Predicted readthrough transcript (NMD candidate), 44503, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm44503E9PYU5 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm44503E9PYU5 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm44503E9PYU5 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm44503E9PYU5 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm44503E9PYU5 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm44503E9PYU5 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.81■□□□□ 0.6
Gm44503E9PYU5 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm44503E9PYU5 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm44503E9PYU5 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm44503E9PYU5 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm44503E9PYU5 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm44503E9PYU5 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm44503E9PYU5 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Gm44503E9PYU5 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Gm44503E9PYU5 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm44503E9PYU5 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm44503E9PYU5 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
Gm44503E9PYU5 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.8■□□□□ 0.6
Gm44503E9PYU5 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm44503E9PYU5 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Gm44503E9PYU5 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Gm44503E9PYU5 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm44503E9PYU5 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm44503E9PYU5 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Gm44503E9PYU5 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.8■□□□□ 0.6
Gm44503E9PYU5 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm44503E9PYU5 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm44503E9PYU5 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm44503E9PYU5 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm44503E9PYU5 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm44503E9PYU5 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm44503E9PYU5 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm44503E9PYU5 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm44503E9PYU5 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Gm44503E9PYU5 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.79■□□□□ 0.6
Gm44503E9PYU5 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm44503E9PYU5 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.79■□□□□ 0.6
Gm44503E9PYU5 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Gm44503E9PYU5 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm44503E9PYU5 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm44503E9PYU5 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm44503E9PYU5 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm44503E9PYU5 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Gm44503E9PYU5 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm44503E9PYU5 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm44503E9PYU5 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm44503E9PYU5 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm44503E9PYU5 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm44503E9PYU5 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
Gm44503E9PYU5 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Gm44503E9PYU5 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm44503E9PYU5 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Gm44503E9PYU5 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm44503E9PYU5 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm44503E9PYU5 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm44503E9PYU5 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm44503E9PYU5 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.78■□□□□ 0.6
Gm44503E9PYU5 Gm15467-201ENSMUST00000120582 445 ntBASIC18.78■□□□□ 0.6
Gm44503E9PYU5 Gm15173-201ENSMUST00000122049 433 ntBASIC18.78■□□□□ 0.6
Gm44503E9PYU5 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.78■□□□□ 0.6
Gm44503E9PYU5 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.78■□□□□ 0.6
Gm44503E9PYU5 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.78■□□□□ 0.6
Gm44503E9PYU5 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.78■□□□□ 0.6
Gm44503E9PYU5 Gm15590-201ENSMUST00000078419 552 ntBASIC18.78■□□□□ 0.6
Gm44503E9PYU5 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gm44503E9PYU5 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.78■□□□□ 0.6
Gm44503E9PYU5 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm44503E9PYU5 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm44503E9PYU5 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.77■□□□□ 0.6
Gm44503E9PYU5 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm44503E9PYU5 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm44503E9PYU5 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm44503E9PYU5 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm44503E9PYU5 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gm44503E9PYU5 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm44503E9PYU5 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.77■□□□□ 0.6
Gm44503E9PYU5 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm44503E9PYU5 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm44503E9PYU5 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm44503E9PYU5 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.77■□□□□ 0.6
Gm44503E9PYU5 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gm44503E9PYU5 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.77■□□□□ 0.6
Gm44503E9PYU5 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.77■□□□□ 0.6
Gm44503E9PYU5 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm44503E9PYU5 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm44503E9PYU5 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.77■□□□□ 0.6
Gm44503E9PYU5 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gm44503E9PYU5 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Gm44503E9PYU5 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gm44503E9PYU5 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm44503E9PYU5 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.76■□□□□ 0.59
Gm44503E9PYU5 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Gm44503E9PYU5 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm44503E9PYU5 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Gm44503E9PYU5 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm44503E9PYU5 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Gm44503E9PYU5 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Gm44503E9PYU5 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.76■□□□□ 0.59
Gm44503E9PYU5 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.76■□□□□ 0.59
Gm44503E9PYU5 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms