Protein–RNA interactions for Protein: C0HKE1

Hist1h2ab, Histone H2A type 1-B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2abC0HKE1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hist1h2abC0HKE1 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.05■□□□□ -0
Hist1h2abC0HKE1 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Hist1h2abC0HKE1 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hist1h2abC0HKE1 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hist1h2abC0HKE1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Hist1h2abC0HKE1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hist1h2abC0HKE1 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hist1h2abC0HKE1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Hist1h2abC0HKE1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hist1h2abC0HKE1 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hist1h2abC0HKE1 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hist1h2abC0HKE1 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hist1h2abC0HKE1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hist1h2abC0HKE1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Hist1h2abC0HKE1 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hist1h2abC0HKE1 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hist1h2abC0HKE1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Hist1h2abC0HKE1 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.04■□□□□ -0
Hist1h2abC0HKE1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hist1h2abC0HKE1 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hist1h2abC0HKE1 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Hist1h2abC0HKE1 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Hist1h2abC0HKE1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Hist1h2abC0HKE1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Hist1h2abC0HKE1 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hist1h2abC0HKE1 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.04■□□□□ -0
Hist1h2abC0HKE1 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hist1h2abC0HKE1 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hist1h2abC0HKE1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hist1h2abC0HKE1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.04■□□□□ -0
Hist1h2abC0HKE1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hist1h2abC0HKE1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hist1h2abC0HKE1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hist1h2abC0HKE1 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hist1h2abC0HKE1 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hist1h2abC0HKE1 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hist1h2abC0HKE1 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Hist1h2abC0HKE1 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.04■□□□□ -0
Hist1h2abC0HKE1 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hist1h2abC0HKE1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Hist1h2abC0HKE1 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hist1h2abC0HKE1 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Hist1h2abC0HKE1 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hist1h2abC0HKE1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hist1h2abC0HKE1 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hist1h2abC0HKE1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hist1h2abC0HKE1 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hist1h2abC0HKE1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Hist1h2abC0HKE1 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Hist1h2abC0HKE1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Hist1h2abC0HKE1 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hist1h2abC0HKE1 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.03■□□□□ -0
Hist1h2abC0HKE1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hist1h2abC0HKE1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.03■□□□□ -0
Hist1h2abC0HKE1 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hist1h2abC0HKE1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.03■□□□□ -0
Hist1h2abC0HKE1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hist1h2abC0HKE1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hist1h2abC0HKE1 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hist1h2abC0HKE1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hist1h2abC0HKE1 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hist1h2abC0HKE1 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hist1h2abC0HKE1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Hist1h2abC0HKE1 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hist1h2abC0HKE1 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hist1h2abC0HKE1 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Hist1h2abC0HKE1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hist1h2abC0HKE1 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hist1h2abC0HKE1 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Hist1h2abC0HKE1 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hist1h2abC0HKE1 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hist1h2abC0HKE1 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hist1h2abC0HKE1 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.02■□□□□ -0
Hist1h2abC0HKE1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hist1h2abC0HKE1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
Hist1h2abC0HKE1 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.02■□□□□ -0
Hist1h2abC0HKE1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hist1h2abC0HKE1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.02■□□□□ -0
Hist1h2abC0HKE1 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hist1h2abC0HKE1 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.02■□□□□ -0
Hist1h2abC0HKE1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.02■□□□□ -0
Hist1h2abC0HKE1 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.02□□□□□ -0.01
Hist1h2abC0HKE1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Hist1h2abC0HKE1 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hist1h2abC0HKE1 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hist1h2abC0HKE1 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hist1h2abC0HKE1 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Hist1h2abC0HKE1 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hist1h2abC0HKE1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.01□□□□□ -0.01
Hist1h2abC0HKE1 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Hist1h2abC0HKE1 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hist1h2abC0HKE1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hist1h2abC0HKE1 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hist1h2abC0HKE1 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hist1h2abC0HKE1 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Hist1h2abC0HKE1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.01□□□□□ -0.01
Hist1h2abC0HKE1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.01□□□□□ -0.01
Hist1h2abC0HKE1 Gm30025-201ENSMUST00000218555 728 ntBASIC15.01□□□□□ -0.01
Hist1h2abC0HKE1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms