Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn7aB1AYL1 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Scn7aB1AYL1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn7aB1AYL1 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn7aB1AYL1 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn7aB1AYL1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn7aB1AYL1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC21.09■□□□□ 0.97
Scn7aB1AYL1 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC21.09■□□□□ 0.97
Scn7aB1AYL1 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn7aB1AYL1 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn7aB1AYL1 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn7aB1AYL1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn7aB1AYL1 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn7aB1AYL1 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn7aB1AYL1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC21.09■□□□□ 0.97
Scn7aB1AYL1 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn7aB1AYL1 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn7aB1AYL1 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC21.09■□□□□ 0.97
Scn7aB1AYL1 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC21.09■□□□□ 0.97
Scn7aB1AYL1 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Scn7aB1AYL1 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Scn7aB1AYL1 Gm45683-201ENSMUST00000210825 1247 ntBASIC21.09■□□□□ 0.97
Scn7aB1AYL1 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn7aB1AYL1 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn7aB1AYL1 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scn7aB1AYL1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Scn7aB1AYL1 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scn7aB1AYL1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scn7aB1AYL1 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Scn7aB1AYL1 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scn7aB1AYL1 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Scn7aB1AYL1 Gm24513-201ENSMUST00000174964 138 ntBASIC21.08■□□□□ 0.96
Scn7aB1AYL1 Mir3113-201ENSMUST00000175478 76 ntBASIC21.08■□□□□ 0.96
Scn7aB1AYL1 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
Scn7aB1AYL1 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Scn7aB1AYL1 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC21.08■□□□□ 0.96
Scn7aB1AYL1 AC147366.1-201ENSMUST00000227671 852 ntBASIC21.08■□□□□ 0.96
Scn7aB1AYL1 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Scn7aB1AYL1 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Scn7aB1AYL1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Scn7aB1AYL1 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Gm4609-201ENSMUST00000106443 1002 ntBASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Gm5138-201ENSMUST00000113842 1002 ntBASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Gm15191-201ENSMUST00000117933 1000 ntBASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Gm12182-201ENSMUST00000118655 1008 ntBASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Gm13882-201ENSMUST00000120886 1002 ntBASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Gm10284-201ENSMUST00000145057 1005 ntBASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Gm10481-201ENSMUST00000179228 1002 ntBASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Gm2574-201ENSMUST00000181051 1002 ntBASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Gm3200-201ENSMUST00000181493 1002 ntBASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Gm8825-201ENSMUST00000182565 998 ntBASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Gm4518-201ENSMUST00000182638 718 ntBASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Gm8330-201ENSMUST00000182754 1008 ntBASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Gm4575-201ENSMUST00000182991 1002 ntBASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Gm8709-201ENSMUST00000183230 1012 ntBASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Gm5253-201ENSMUST00000187104 1025 ntBASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Gm9682-201ENSMUST00000197505 556 ntBASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Gm10293-201ENSMUST00000076317 1002 ntBASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Gm6316-201ENSMUST00000082064 1020 ntBASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Rarb-207ENSMUST00000225921 2756 ntBASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn7aB1AYL1 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn7aB1AYL1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn7aB1AYL1 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Scn7aB1AYL1 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn7aB1AYL1 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Scn7aB1AYL1 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn7aB1AYL1 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn7aB1AYL1 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn7aB1AYL1 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Scn7aB1AYL1 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Scn7aB1AYL1 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn7aB1AYL1 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC21.05■□□□□ 0.96
Scn7aB1AYL1 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
Scn7aB1AYL1 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC21.05■□□□□ 0.96
Scn7aB1AYL1 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC21.05■□□□□ 0.96
Scn7aB1AYL1 Gm2756-201ENSMUST00000195851 400 ntBASIC21.05■□□□□ 0.96
Scn7aB1AYL1 AC090659.1-201ENSMUST00000224334 768 ntBASIC21.05■□□□□ 0.96
Scn7aB1AYL1 AC124549.3-201ENSMUST00000225541 367 ntBASIC21.05■□□□□ 0.96
Scn7aB1AYL1 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn7aB1AYL1 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn7aB1AYL1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms