Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv17A0A140T8P8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv17A0A140T8P8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv17A0A140T8P8 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv17A0A140T8P8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv17A0A140T8P8 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv17A0A140T8P8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv17A0A140T8P8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.6□□□□□ -0.39
Trbv17A0A140T8P8 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trbv17A0A140T8P8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv17A0A140T8P8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv17A0A140T8P8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC12.59□□□□□ -0.39
Trbv17A0A140T8P8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv17A0A140T8P8 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv17A0A140T8P8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv17A0A140T8P8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv17A0A140T8P8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv17A0A140T8P8 Gm6433-201ENSMUST00000118634 875 ntBASIC12.59□□□□□ -0.39
Trbv17A0A140T8P8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.59□□□□□ -0.39
Trbv17A0A140T8P8 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv17A0A140T8P8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.59□□□□□ -0.39
Trbv17A0A140T8P8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv17A0A140T8P8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv17A0A140T8P8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv17A0A140T8P8 Gm9987-201ENSMUST00000069768 567 ntBASIC12.59□□□□□ -0.39
Trbv17A0A140T8P8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv17A0A140T8P8 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv17A0A140T8P8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv17A0A140T8P8 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv17A0A140T8P8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv17A0A140T8P8 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.59□□□□□ -0.39
Trbv17A0A140T8P8 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv17A0A140T8P8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv17A0A140T8P8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv17A0A140T8P8 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv17A0A140T8P8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trbv17A0A140T8P8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trbv17A0A140T8P8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 Gm7370-201ENSMUST00000219471 767 ntBASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv17A0A140T8P8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv17A0A140T8P8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trbv17A0A140T8P8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv17A0A140T8P8 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv17A0A140T8P8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv17A0A140T8P8 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv17A0A140T8P8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv17A0A140T8P8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trbv17A0A140T8P8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv17A0A140T8P8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.57□□□□□ -0.4
Trbv17A0A140T8P8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv17A0A140T8P8 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv17A0A140T8P8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Trbv17A0A140T8P8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trbv17A0A140T8P8 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv17A0A140T8P8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.57□□□□□ -0.4
Trbv17A0A140T8P8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Trbv17A0A140T8P8 Gm7213-201ENSMUST00000215977 950 ntBASIC12.57□□□□□ -0.4
Trbv17A0A140T8P8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.57□□□□□ -0.4
Trbv17A0A140T8P8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv17A0A140T8P8 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv17A0A140T8P8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv17A0A140T8P8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.57□□□□□ -0.4
Trbv17A0A140T8P8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv17A0A140T8P8 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv17A0A140T8P8 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv17A0A140T8P8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.57□□□□□ -0.4
Trbv17A0A140T8P8 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv17A0A140T8P8 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms