Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh7A0A0A6YY83 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pcdh7A0A0A6YY83 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh7A0A0A6YY83 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh7A0A0A6YY83 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh7A0A0A6YY83 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh7A0A0A6YY83 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pcdh7A0A0A6YY83 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh7A0A0A6YY83 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.91■□□□□ 0.3
Pcdh7A0A0A6YY83 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.91■□□□□ 0.3
Pcdh7A0A0A6YY83 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh7A0A0A6YY83 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh7A0A0A6YY83 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh7A0A0A6YY83 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pcdh7A0A0A6YY83 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh7A0A0A6YY83 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh7A0A0A6YY83 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh7A0A0A6YY83 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh7A0A0A6YY83 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pcdh7A0A0A6YY83 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Pcdh7A0A0A6YY83 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pcdh7A0A0A6YY83 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh7A0A0A6YY83 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh7A0A0A6YY83 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdh7A0A0A6YY83 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh7A0A0A6YY83 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh7A0A0A6YY83 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pcdh7A0A0A6YY83 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh7A0A0A6YY83 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.9■□□□□ 0.3
Pcdh7A0A0A6YY83 Gm10052-201ENSMUST00000168019 960 ntBASIC16.9■□□□□ 0.3
Pcdh7A0A0A6YY83 Gm6623-201ENSMUST00000173570 544 ntBASIC16.9■□□□□ 0.3
Pcdh7A0A0A6YY83 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.9■□□□□ 0.3
Pcdh7A0A0A6YY83 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.9■□□□□ 0.3
Pcdh7A0A0A6YY83 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh7A0A0A6YY83 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh7A0A0A6YY83 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pcdh7A0A0A6YY83 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh7A0A0A6YY83 Gm7729-201ENSMUST00000050143 801 ntBASIC16.9■□□□□ 0.3
Pcdh7A0A0A6YY83 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh7A0A0A6YY83 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh7A0A0A6YY83 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Pcdh7A0A0A6YY83 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh7A0A0A6YY83 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh7A0A0A6YY83 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdh7A0A0A6YY83 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh7A0A0A6YY83 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh7A0A0A6YY83 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.89■□□□□ 0.3
Pcdh7A0A0A6YY83 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pcdh7A0A0A6YY83 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pcdh7A0A0A6YY83 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh7A0A0A6YY83 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh7A0A0A6YY83 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh7A0A0A6YY83 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh7A0A0A6YY83 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh7A0A0A6YY83 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh7A0A0A6YY83 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh7A0A0A6YY83 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Pcdh7A0A0A6YY83 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.89■□□□□ 0.29
Pcdh7A0A0A6YY83 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Pcdh7A0A0A6YY83 AA414768-201ENSMUST00000121924 1257 ntBASIC16.89■□□□□ 0.29
Pcdh7A0A0A6YY83 Gm44430-201ENSMUST00000203376 995 ntBASIC16.89■□□□□ 0.29
Pcdh7A0A0A6YY83 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Pcdh7A0A0A6YY83 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.89■□□□□ 0.29
Pcdh7A0A0A6YY83 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh7A0A0A6YY83 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh7A0A0A6YY83 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh7A0A0A6YY83 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh7A0A0A6YY83 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh7A0A0A6YY83 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh7A0A0A6YY83 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Pcdh7A0A0A6YY83 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Pcdh7A0A0A6YY83 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh7A0A0A6YY83 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh7A0A0A6YY83 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh7A0A0A6YY83 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdh7A0A0A6YY83 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh7A0A0A6YY83 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Pcdh7A0A0A6YY83 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh7A0A0A6YY83 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh7A0A0A6YY83 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh7A0A0A6YY83 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.88■□□□□ 0.29
Pcdh7A0A0A6YY83 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Pcdh7A0A0A6YY83 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.88■□□□□ 0.29
Pcdh7A0A0A6YY83 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh7A0A0A6YY83 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh7A0A0A6YY83 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh7A0A0A6YY83 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh7A0A0A6YY83 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh7A0A0A6YY83 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Pcdh7A0A0A6YY83 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh7A0A0A6YY83 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh7A0A0A6YY83 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh7A0A0A6YY83 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh7A0A0A6YY83 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh7A0A0A6YY83 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Pcdh7A0A0A6YY83 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh7A0A0A6YY83 Gm11950-201ENSMUST00000121615 838 ntBASIC16.87■□□□□ 0.29
Pcdh7A0A0A6YY83 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdh7A0A0A6YY83 Gm6345-202ENSMUST00000180900 204 ntBASIC16.87■□□□□ 0.29
Pcdh7A0A0A6YY83 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms