Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-4A0A075B6B4 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-4A0A075B6B4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-4A0A075B6B4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-4A0A075B6B4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav6-4A0A075B6B4 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav6-4A0A075B6B4 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-4A0A075B6B4 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-4A0A075B6B4 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-4A0A075B6B4 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Trav6-4A0A075B6B4 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-4A0A075B6B4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-4A0A075B6B4 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-4A0A075B6B4 Gm13216-201ENSMUST00000117145 591 ntBASIC12.65□□□□□ -0.38
Trav6-4A0A075B6B4 Gm9013-201ENSMUST00000132939 882 ntBASIC12.65□□□□□ -0.38
Trav6-4A0A075B6B4 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav6-4A0A075B6B4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav6-4A0A075B6B4 Gm37722-201ENSMUST00000193757 208 ntBASIC12.65□□□□□ -0.38
Trav6-4A0A075B6B4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.65□□□□□ -0.38
Trav6-4A0A075B6B4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-4A0A075B6B4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.65□□□□□ -0.38
Trav6-4A0A075B6B4 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-4A0A075B6B4 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-4A0A075B6B4 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav6-4A0A075B6B4 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav6-4A0A075B6B4 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-4A0A075B6B4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-4A0A075B6B4 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-4A0A075B6B4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav6-4A0A075B6B4 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-4A0A075B6B4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC12.65□□□□□ -0.38
Trav6-4A0A075B6B4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav6-4A0A075B6B4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav6-4A0A075B6B4 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav6-4A0A075B6B4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-4A0A075B6B4 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-4A0A075B6B4 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-4A0A075B6B4 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-4A0A075B6B4 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-4A0A075B6B4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav6-4A0A075B6B4 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-4A0A075B6B4 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-4A0A075B6B4 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav6-4A0A075B6B4 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-4A0A075B6B4 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-4A0A075B6B4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.64□□□□□ -0.39
Trav6-4A0A075B6B4 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.64□□□□□ -0.39
Trav6-4A0A075B6B4 Gm25016-201ENSMUST00000158399 131 ntBASIC12.64□□□□□ -0.39
Trav6-4A0A075B6B4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-4A0A075B6B4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-4A0A075B6B4 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-4A0A075B6B4 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-4A0A075B6B4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav6-4A0A075B6B4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-4A0A075B6B4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-4A0A075B6B4 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-4A0A075B6B4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-4A0A075B6B4 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-4A0A075B6B4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-4A0A075B6B4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-4A0A075B6B4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-4A0A075B6B4 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-4A0A075B6B4 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC12.64□□□□□ -0.39
Trav6-4A0A075B6B4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-4A0A075B6B4 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Trav6-4A0A075B6B4 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-4A0A075B6B4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-4A0A075B6B4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-4A0A075B6B4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-4A0A075B6B4 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-4A0A075B6B4 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-4A0A075B6B4 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-4A0A075B6B4 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-4A0A075B6B4 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav6-4A0A075B6B4 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav6-4A0A075B6B4 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-4A0A075B6B4 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.63□□□□□ -0.39
Trav6-4A0A075B6B4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Trav6-4A0A075B6B4 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-4A0A075B6B4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-4A0A075B6B4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-4A0A075B6B4 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.63□□□□□ -0.39
Trav6-4A0A075B6B4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-4A0A075B6B4 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-4A0A075B6B4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav6-4A0A075B6B4 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-4A0A075B6B4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-4A0A075B6B4 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-4A0A075B6B4 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-4A0A075B6B4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav6-4A0A075B6B4 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav6-4A0A075B6B4 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-4A0A075B6B4 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-4A0A075B6B4 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-4A0A075B6B4 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-4A0A075B6B4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-4A0A075B6B4 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav6-4A0A075B6B4 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav6-4A0A075B6B4 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav6-4A0A075B6B4 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms