Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav18A0A075B656 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav18A0A075B656 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.48□□□□□ -0.25
Trav18A0A075B656 Odf3b-204ENSMUST00000227834 930 ntBASIC13.48□□□□□ -0.25
Trav18A0A075B656 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav18A0A075B656 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav18A0A075B656 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav18A0A075B656 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav18A0A075B656 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav18A0A075B656 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav18A0A075B656 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav18A0A075B656 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav18A0A075B656 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav18A0A075B656 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav18A0A075B656 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Trav18A0A075B656 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav18A0A075B656 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav18A0A075B656 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav18A0A075B656 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav18A0A075B656 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav18A0A075B656 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav18A0A075B656 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav18A0A075B656 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.47□□□□□ -0.25
Trav18A0A075B656 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav18A0A075B656 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav18A0A075B656 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav18A0A075B656 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav18A0A075B656 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav18A0A075B656 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav18A0A075B656 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav18A0A075B656 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav18A0A075B656 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav18A0A075B656 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav18A0A075B656 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
Trav18A0A075B656 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav18A0A075B656 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.46□□□□□ -0.25
Trav18A0A075B656 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav18A0A075B656 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav18A0A075B656 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav18A0A075B656 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav18A0A075B656 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav18A0A075B656 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trav18A0A075B656 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav18A0A075B656 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav18A0A075B656 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC13.46□□□□□ -0.25
Trav18A0A075B656 Gm8520-201ENSMUST00000186517 868 ntBASIC13.46□□□□□ -0.25
Trav18A0A075B656 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.46□□□□□ -0.25
Trav18A0A075B656 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav18A0A075B656 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav18A0A075B656 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav18A0A075B656 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav18A0A075B656 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav18A0A075B656 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav18A0A075B656 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Trav18A0A075B656 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav18A0A075B656 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav18A0A075B656 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav18A0A075B656 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav18A0A075B656 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.46□□□□□ -0.26
Trav18A0A075B656 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.45□□□□□ -0.26
Trav18A0A075B656 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav18A0A075B656 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav18A0A075B656 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav18A0A075B656 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav18A0A075B656 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav18A0A075B656 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav18A0A075B656 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav18A0A075B656 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav18A0A075B656 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav18A0A075B656 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav18A0A075B656 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav18A0A075B656 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav18A0A075B656 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Trav18A0A075B656 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.45□□□□□ -0.26
Trav18A0A075B656 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav18A0A075B656 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav18A0A075B656 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav18A0A075B656 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav18A0A075B656 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav18A0A075B656 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav18A0A075B656 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav18A0A075B656 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav18A0A075B656 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav18A0A075B656 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav18A0A075B656 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav18A0A075B656 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Trav18A0A075B656 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav18A0A075B656 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav18A0A075B656 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav18A0A075B656 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Trav18A0A075B656 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Trav18A0A075B656 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Trav18A0A075B656 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav18A0A075B656 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav18A0A075B656 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav18A0A075B656 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav18A0A075B656 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav18A0A075B656 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav18A0A075B656 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav18A0A075B656 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms