Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trav3-4A0A075B654 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-4A0A075B654 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-4A0A075B654 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-4A0A075B654 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-4A0A075B654 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-4A0A075B654 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-4A0A075B654 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-4A0A075B654 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-4A0A075B654 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-4A0A075B654 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-4A0A075B654 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-4A0A075B654 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-4A0A075B654 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-4A0A075B654 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-4A0A075B654 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-4A0A075B654 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Trav3-4A0A075B654 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Trav3-4A0A075B654 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-4A0A075B654 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC11.1□□□□□ -0.63
Trav3-4A0A075B654 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-4A0A075B654 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav3-4A0A075B654 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-4A0A075B654 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-4A0A075B654 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trav3-4A0A075B654 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-4A0A075B654 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav3-4A0A075B654 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trav3-4A0A075B654 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-4A0A075B654 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-4A0A075B654 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-4A0A075B654 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-4A0A075B654 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Gm29791-202ENSMUST00000207888 369 ntBASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-4A0A075B654 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-4A0A075B654 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms