Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav8n-2A0A075B633 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.02■□□□□ -0
Trav8n-2A0A075B633 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav8n-2A0A075B633 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav8n-2A0A075B633 Gm11779-201ENSMUST00000118541 368 ntBASIC15.02■□□□□ -0
Trav8n-2A0A075B633 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav8n-2A0A075B633 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.02■□□□□ -0
Trav8n-2A0A075B633 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trav8n-2A0A075B633 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav8n-2A0A075B633 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav8n-2A0A075B633 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Trav8n-2A0A075B633 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav8n-2A0A075B633 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav8n-2A0A075B633 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav8n-2A0A075B633 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav8n-2A0A075B633 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav8n-2A0A075B633 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8n-2A0A075B633 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav8n-2A0A075B633 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8n-2A0A075B633 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav8n-2A0A075B633 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8n-2A0A075B633 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav8n-2A0A075B633 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8n-2A0A075B633 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8n-2A0A075B633 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8n-2A0A075B633 Gm12260-201ENSMUST00000122447 411 ntBASIC15.01□□□□□ -0.01
Trav8n-2A0A075B633 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8n-2A0A075B633 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8n-2A0A075B633 Gm6736-201ENSMUST00000166583 948 ntBASIC15.01□□□□□ -0.01
Trav8n-2A0A075B633 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.01□□□□□ -0.01
Trav8n-2A0A075B633 AV026068-213ENSMUST00000223675 1171 ntBASIC15.01□□□□□ -0.01
Trav8n-2A0A075B633 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Trav8n-2A0A075B633 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8n-2A0A075B633 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8n-2A0A075B633 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav8n-2A0A075B633 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav8n-2A0A075B633 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8n-2A0A075B633 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8n-2A0A075B633 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8n-2A0A075B633 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8n-2A0A075B633 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15□□□□□ -0.01
Trav8n-2A0A075B633 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8n-2A0A075B633 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8n-2A0A075B633 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav8n-2A0A075B633 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8n-2A0A075B633 Gm8097-201ENSMUST00000117903 829 ntBASIC15□□□□□ -0.01
Trav8n-2A0A075B633 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15□□□□□ -0.01
Trav8n-2A0A075B633 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav8n-2A0A075B633 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15□□□□□ -0.01
Trav8n-2A0A075B633 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav8n-2A0A075B633 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15□□□□□ -0.01
Trav8n-2A0A075B633 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15□□□□□ -0.01
Trav8n-2A0A075B633 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8n-2A0A075B633 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8n-2A0A075B633 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8n-2A0A075B633 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8n-2A0A075B633 Gm15590-201ENSMUST00000078419 552 ntBASIC15□□□□□ -0.01
Trav8n-2A0A075B633 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav8n-2A0A075B633 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8n-2A0A075B633 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8n-2A0A075B633 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8n-2A0A075B633 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trav8n-2A0A075B633 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8n-2A0A075B633 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav8n-2A0A075B633 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8n-2A0A075B633 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8n-2A0A075B633 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8n-2A0A075B633 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8n-2A0A075B633 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8n-2A0A075B633 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav8n-2A0A075B633 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8n-2A0A075B633 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav8n-2A0A075B633 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8n-2A0A075B633 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8n-2A0A075B633 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8n-2A0A075B633 Gm27702-201ENSMUST00000184512 56 ntBASIC14.99□□□□□ -0.01
Trav8n-2A0A075B633 Gm6550-201ENSMUST00000187574 993 ntBASIC14.99□□□□□ -0.01
Trav8n-2A0A075B633 Gm2756-201ENSMUST00000195851 400 ntBASIC14.99□□□□□ -0.01
Trav8n-2A0A075B633 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8n-2A0A075B633 Gm9172-201ENSMUST00000212092 954 ntBASIC14.99□□□□□ -0.01
Trav8n-2A0A075B633 Gm8655-201ENSMUST00000221159 852 ntBASIC14.99□□□□□ -0.01
Trav8n-2A0A075B633 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.99□□□□□ -0.01
Trav8n-2A0A075B633 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.99□□□□□ -0.01
Trav8n-2A0A075B633 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8n-2A0A075B633 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8n-2A0A075B633 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8n-2A0A075B633 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8n-2A0A075B633 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trav8n-2A0A075B633 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8n-2A0A075B633 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8n-2A0A075B633 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav8n-2A0A075B633 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8n-2A0A075B633 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8n-2A0A075B633 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav8n-2A0A075B633 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8n-2A0A075B633 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8n-2A0A075B633 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8n-2A0A075B633 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8n-2A0A075B633 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms