Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5-1A0A075B5Z7 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.1□□□□□ -0.15
Trav5-1A0A075B5Z7 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5-1A0A075B5Z7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5-1A0A075B5Z7 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav5-1A0A075B5Z7 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5-1A0A075B5Z7 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5-1A0A075B5Z7 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5-1A0A075B5Z7 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5-1A0A075B5Z7 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
Trav5-1A0A075B5Z7 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5-1A0A075B5Z7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-1A0A075B5Z7 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-1A0A075B5Z7 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-1A0A075B5Z7 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav5-1A0A075B5Z7 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-1A0A075B5Z7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-1A0A075B5Z7 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-1A0A075B5Z7 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-1A0A075B5Z7 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-1A0A075B5Z7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-1A0A075B5Z7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.09□□□□□ -0.15
Trav5-1A0A075B5Z7 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav5-1A0A075B5Z7 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-1A0A075B5Z7 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-1A0A075B5Z7 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-1A0A075B5Z7 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav5-1A0A075B5Z7 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.09□□□□□ -0.15
Trav5-1A0A075B5Z7 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-1A0A075B5Z7 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-1A0A075B5Z7 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-1A0A075B5Z7 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-1A0A075B5Z7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trav5-1A0A075B5Z7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-1A0A075B5Z7 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-1A0A075B5Z7 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-1A0A075B5Z7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-1A0A075B5Z7 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav5-1A0A075B5Z7 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav5-1A0A075B5Z7 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav5-1A0A075B5Z7 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trav5-1A0A075B5Z7 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav5-1A0A075B5Z7 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav5-1A0A075B5Z7 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
Trav5-1A0A075B5Z7 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav5-1A0A075B5Z7 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav5-1A0A075B5Z7 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5-1A0A075B5Z7 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5-1A0A075B5Z7 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trav5-1A0A075B5Z7 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.08□□□□□ -0.16
Trav5-1A0A075B5Z7 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5-1A0A075B5Z7 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5-1A0A075B5Z7 Gm15372-201ENSMUST00000120729 834 ntBASIC14.08□□□□□ -0.16
Trav5-1A0A075B5Z7 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.08□□□□□ -0.16
Trav5-1A0A075B5Z7 Gm36967-201ENSMUST00000193814 266 ntBASIC14.08□□□□□ -0.16
Trav5-1A0A075B5Z7 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav5-1A0A075B5Z7 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav5-1A0A075B5Z7 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5-1A0A075B5Z7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5-1A0A075B5Z7 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5-1A0A075B5Z7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5-1A0A075B5Z7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.08□□□□□ -0.16
Trav5-1A0A075B5Z7 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5-1A0A075B5Z7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5-1A0A075B5Z7 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5-1A0A075B5Z7 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5-1A0A075B5Z7 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5-1A0A075B5Z7 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-1A0A075B5Z7 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-1A0A075B5Z7 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav5-1A0A075B5Z7 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav5-1A0A075B5Z7 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav5-1A0A075B5Z7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-1A0A075B5Z7 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav5-1A0A075B5Z7 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-1A0A075B5Z7 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
Trav5-1A0A075B5Z7 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav5-1A0A075B5Z7 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav5-1A0A075B5Z7 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.07□□□□□ -0.16
Trav5-1A0A075B5Z7 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.07□□□□□ -0.16
Trav5-1A0A075B5Z7 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-1A0A075B5Z7 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav5-1A0A075B5Z7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-1A0A075B5Z7 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-1A0A075B5Z7 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-1A0A075B5Z7 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-1A0A075B5Z7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-1A0A075B5Z7 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-1A0A075B5Z7 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-1A0A075B5Z7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-1A0A075B5Z7 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5-1A0A075B5Z7 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5-1A0A075B5Z7 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.06□□□□□ -0.16
Trav5-1A0A075B5Z7 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5-1A0A075B5Z7 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5-1A0A075B5Z7 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav5-1A0A075B5Z7 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav5-1A0A075B5Z7 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5-1A0A075B5Z7 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav5-1A0A075B5Z7 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms