Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav1A0A075B5Z4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav1A0A075B5Z4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav1A0A075B5Z4 Gm26039-201ENSMUST00000158152 144 ntBASIC15.26■□□□□ 0.03
Trav1A0A075B5Z4 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav1A0A075B5Z4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav1A0A075B5Z4 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.26■□□□□ 0.03
Trav1A0A075B5Z4 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav1A0A075B5Z4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav1A0A075B5Z4 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.26■□□□□ 0.03
Trav1A0A075B5Z4 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav1A0A075B5Z4 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav1A0A075B5Z4 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav1A0A075B5Z4 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav1A0A075B5Z4 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav1A0A075B5Z4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav1A0A075B5Z4 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav1A0A075B5Z4 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav1A0A075B5Z4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Trav1A0A075B5Z4 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav1A0A075B5Z4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav1A0A075B5Z4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav1A0A075B5Z4 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav1A0A075B5Z4 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav1A0A075B5Z4 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav1A0A075B5Z4 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav1A0A075B5Z4 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav1A0A075B5Z4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav1A0A075B5Z4 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav1A0A075B5Z4 Mir5130-201ENSMUST00000175160 84 ntBASIC15.25■□□□□ 0.03
Trav1A0A075B5Z4 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav1A0A075B5Z4 Gm45058-201ENSMUST00000205810 766 ntBASIC15.25■□□□□ 0.03
Trav1A0A075B5Z4 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav1A0A075B5Z4 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav1A0A075B5Z4 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.25■□□□□ 0.03
Trav1A0A075B5Z4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav1A0A075B5Z4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav1A0A075B5Z4 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav1A0A075B5Z4 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav1A0A075B5Z4 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav1A0A075B5Z4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav1A0A075B5Z4 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav1A0A075B5Z4 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav1A0A075B5Z4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav1A0A075B5Z4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav1A0A075B5Z4 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav1A0A075B5Z4 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav1A0A075B5Z4 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.25■□□□□ 0.03
Trav1A0A075B5Z4 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav1A0A075B5Z4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav1A0A075B5Z4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav1A0A075B5Z4 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav1A0A075B5Z4 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav1A0A075B5Z4 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav1A0A075B5Z4 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav1A0A075B5Z4 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav1A0A075B5Z4 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav1A0A075B5Z4 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Trav1A0A075B5Z4 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.24■□□□□ 0.03
Trav1A0A075B5Z4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.24■□□□□ 0.03
Trav1A0A075B5Z4 Gm7889-201ENSMUST00000185591 958 ntBASIC15.24■□□□□ 0.03
Trav1A0A075B5Z4 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.24■□□□□ 0.03
Trav1A0A075B5Z4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav1A0A075B5Z4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav1A0A075B5Z4 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav1A0A075B5Z4 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav1A0A075B5Z4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav1A0A075B5Z4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav1A0A075B5Z4 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav1A0A075B5Z4 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav1A0A075B5Z4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav1A0A075B5Z4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav1A0A075B5Z4 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.23■□□□□ 0.03
Trav1A0A075B5Z4 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav1A0A075B5Z4 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav1A0A075B5Z4 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav1A0A075B5Z4 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav1A0A075B5Z4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav1A0A075B5Z4 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.23■□□□□ 0.03
Trav1A0A075B5Z4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav1A0A075B5Z4 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav1A0A075B5Z4 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav1A0A075B5Z4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.23■□□□□ 0.03
Trav1A0A075B5Z4 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.23■□□□□ 0.03
Trav1A0A075B5Z4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav1A0A075B5Z4 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav1A0A075B5Z4 Gm43799-201ENSMUST00000201845 579 ntBASIC15.23■□□□□ 0.03
Trav1A0A075B5Z4 Gm18959-201ENSMUST00000208954 655 ntBASIC15.23■□□□□ 0.03
Trav1A0A075B5Z4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav1A0A075B5Z4 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav1A0A075B5Z4 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav1A0A075B5Z4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav1A0A075B5Z4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav1A0A075B5Z4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.23■□□□□ 0.03
Trav1A0A075B5Z4 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav1A0A075B5Z4 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav1A0A075B5Z4 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav1A0A075B5Z4 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Trav1A0A075B5Z4 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav1A0A075B5Z4 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms