Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC103591.2-201ENST00000265259 766 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CX3CL1P78423 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CX3CL1P78423 RNU6-989P-201ENST00000362756 107 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 RNU6-433P-201ENST00000363216 104 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 SNORD113.2-201ENST00000364166 89 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 Y_RNA.302-201ENST00000364997 102 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CX3CL1P78423 MIR124-3-201ENST00000384866 87 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 MIR708-201ENST00000390708 88 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 U3.29-201ENST00000391296 212 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 RPS16P5-201ENST00000406501 404 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CX3CL1P78423 TPMTP2-201ENST00000414372 726 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 AC009518.2-201ENST00000418056 731 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 AC069213.2-201ENST00000420238 366 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.6□□□□□ -1.83
CX3CL1P78423 AC012065.2-201ENST00000421295 375 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 RPS27AP12-201ENST00000429552 465 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 MTND1P20-201ENST00000430341 950 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 RPL23AP93-201ENST00000440847 484 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.6□□□□□ -1.83
CX3CL1P78423 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.6□□□□□ -1.83
CX3CL1P78423 ARPC3P5-201ENST00000448802 534 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 AC073264.2-201ENST00000448886 166 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 AC005297.2-201ENST00000450430 606 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.6□□□□□ -1.83
CX3CL1P78423 AL513533.1-201ENST00000453728 415 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 MTCO3P16-201ENST00000454456 754 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CX3CL1P78423 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CX3CL1P78423 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.6□□□□□ -1.83
CX3CL1P78423 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.6□□□□□ -1.83
CX3CL1P78423 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.6□□□□□ -1.83
CX3CL1P78423 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.6□□□□□ -1.83
CX3CL1P78423 RNA5SP446-201ENST00000515955 82 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 IGLV3-26-201ENST00000520756 302 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 MTCO1P47-201ENST00000523889 1271 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 AP001781.1-201ENST00000530977 207 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 AL139174.1-201ENST00000531489 886 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 AP006289.1-201ENST00000538089 277 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
CX3CL1P78423 AC109446.2-201ENST00000567872 497 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 AC069061.3-201ENST00000582254 823 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.6□□□□□ -1.83
CX3CL1P78423 AL139395.1-201ENST00000603662 160 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 AC080013.4-201ENST00000607624 649 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 AC091905.2-201ENST00000623143 306 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CX3CL1P78423 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.6□□□□□ -1.83
CX3CL1P78423 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.6□□□□□ -1.83
CX3CL1P78423 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.6□□□□□ -1.83
CX3CL1P78423 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CX3CL1P78423 AC010300.1-201ENST00000600671 5134 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CX3CL1P78423 DCAF13P1-201ENST00000495256 1330 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.6□□□□□ -1.83
CX3CL1P78423 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.6□□□□□ -1.83
CX3CL1P78423 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CX3CL1P78423 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CX3CL1P78423 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CX3CL1P78423 AL022578.1-201ENST00000439330 1433 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CX3CL1P78423 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CX3CL1P78423 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CX3CL1P78423 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CX3CL1P78423 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.59□□□□□ -1.83
CX3CL1P78423 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.59□□□□□ -1.83
CX3CL1P78423 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.59□□□□□ -1.83
CX3CL1P78423 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CX3CL1P78423 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
CX3CL1P78423 AC012020.1-201ENST00000624541 1728 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CX3CL1P78423 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CX3CL1P78423 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CX3CL1P78423 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.59□□□□□ -1.83
CX3CL1P78423 OR4K15-201ENST00000305051 1216 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 AC079741.1-201ENST00000321498 212 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CX3CL1P78423 RNU6-263P-201ENST00000363811 107 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 RNU6-761P-201ENST00000384148 107 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CX3CL1P78423 VN1R8P-201ENST00000407739 893 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 RNA5SP56-201ENST00000410277 118 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 UQCRBP1-201ENST00000421129 336 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 RAD23BP1-201ENST00000421404 1227 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.59□□□□□ -1.83
CX3CL1P78423 PSMA6P3-201ENST00000428242 164 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 AL117351.1-201ENST00000438864 766 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.59□□□□□ -1.83
CX3CL1P78423 NDUFS5P3-201ENST00000450668 321 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.59□□□□□ -1.83
CX3CL1P78423 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.59□□□□□ -1.83
CX3CL1P78423 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.59□□□□□ -1.83
CX3CL1P78423 SNORD108-201ENST00000459332 71 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 AC087312.1-201ENST00000471411 480 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 RPL30P6-201ENST00000475925 342 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms