Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 U3.10-201ENST00000364459 214 ntBASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 Y_RNA.452-201ENST00000384202 108 ntBASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 RNU6-1106P-201ENST00000390845 107 ntBASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 AC073069.1-201ENST00000428657 441 ntBASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 AL390119.1-201ENST00000440329 312 ntBASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 Z98949.2-201ENST00000440996 144 ntBASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 FAM103A2P-201ENST00000444122 354 ntBASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 HMGN2P26-201ENST00000463169 339 ntBASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 RPL21P71-201ENST00000465598 459 ntBASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 RPL23AP12-201ENST00000467573 473 ntBASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 AC100832.1-201ENST00000471945 383 ntBASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 RPS4XP18-201ENST00000495480 763 ntBASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 RNU6-988P-201ENST00000519081 107 ntBASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 AC008562.1-201ENST00000521763 330 ntBASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 AF279873.1-201ENST00000523393 313 ntBASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 SUB1P1-201ENST00000524415 382 ntBASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 MIR8080-201ENST00000622224 89 ntBASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 OR2L1P-202ENST00000641567 1023 ntBASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 GVINP1-202ENST00000531871 7271 ntBASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 AC097063.1-201ENST00000426714 1797 ntBASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 AP005435.3-201ENST00000531260 3198 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 AC114774.1-201ENST00000507410 1770 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 AC067945.1-201ENST00000342609 618 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 RNU6-169P-201ENST00000365336 107 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 Y_RNA.395-201ENST00000383945 109 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 RNU6-317P-201ENST00000384031 107 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 RNU6-952P-201ENST00000391164 108 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 CISD1P1-201ENST00000393907 327 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 AL391361.1-201ENST00000405580 489 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 RNF10P1-201ENST00000418589 369 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 HSPE1P1-201ENST00000421494 318 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 SNRPEP4-201ENST00000435815 279 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 AC012075.1-201ENST00000436549 580 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 SLC25A18P1-201ENST00000449385 454 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 CACYBPP2-201ENST00000453625 678 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 RPL12P39-201ENST00000455456 496 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 RPL7P22-201ENST00000466005 733 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 AL133445.1-201ENST00000467051 452 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 RPS15AP17-201ENST00000470598 390 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 RN7SL583P-201ENST00000475692 287 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 AC068587.1-201ENST00000483613 781 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 AC034222.1-201ENST00000494052 532 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 MTCO1P29-201ENST00000496868 288 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 HMGB3P15-201ENST00000507326 574 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms