Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC6A4P31645 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SLC6A4P31645 AC104260.2-201ENST00000623551 3497 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SLC6A4P31645 RNU6-984P-201ENST00000363236 109 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 RNU1-85P-201ENST00000364127 164 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 RNU6-259P-201ENST00000383999 107 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 RNU5A-6P-201ENST00000384136 116 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 RNU6-921P-201ENST00000384361 107 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 RNA5SP397-201ENST00000391323 118 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 MTCYBP36-201ENST00000404146 440 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.81□□□□□ -1.64
SLC6A4P31645 OFD1P18Y-201ENST00000420889 959 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 MTND4LP11-201ENST00000422184 280 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 AL031736.2-201ENST00000426573 787 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 ISCA1P1-201ENST00000426679 387 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.81□□□□□ -1.64
SLC6A4P31645 RPL23AP16-201ENST00000441715 421 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.81□□□□□ -1.64
SLC6A4P31645 MTND1P1-201ENST00000445453 368 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 RNA5SP103-201ENST00000459503 118 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 AC090142.1-201ENST00000465776 462 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 TMED11P-201ENST00000479478 690 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.81□□□□□ -1.64
SLC6A4P31645 FAM172BP-201ENST00000487497 1089 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.81□□□□□ -1.64
SLC6A4P31645 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SLC6A4P31645 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.81□□□□□ -1.64
SLC6A4P31645 PAICSP4-201ENST00000517543 1253 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 NPM1P6-201ENST00000521088 871 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.81□□□□□ -1.64
SLC6A4P31645 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.81□□□□□ -1.64
SLC6A4P31645 AP004247.1-201ENST00000531556 1289 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 TOMM20P2-201ENST00000540082 421 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.81□□□□□ -1.64
SLC6A4P31645 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.81□□□□□ -1.64
SLC6A4P31645 AC087883.1-201ENST00000551882 391 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.81□□□□□ -1.64
SLC6A4P31645 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.81□□□□□ -1.64
SLC6A4P31645 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.81□□□□□ -1.64
SLC6A4P31645 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SLC6A4P31645 MIR4528-201ENST00000577763 90 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 SNORD39.3-201ENST00000584451 71 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.81□□□□□ -1.64
SLC6A4P31645 AL022154.1-201ENST00000604698 785 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 AC010200.2-201ENST00000605098 235 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 AC006566.1-201ENST00000608943 513 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 U4.5-201ENST00000617137 123 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.81□□□□□ -1.64
SLC6A4P31645 AC095031.1-201ENST00000623685 672 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 U3.53-201ENST00000628922 216 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 AC093591.3-201ENST00000634516 308 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SLC6A4P31645 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.81□□□□□ -1.64
SLC6A4P31645 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC6A4P31645 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SLC6A4P31645 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.81□□□□□ -1.64
SLC6A4P31645 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.81□□□□□ -1.64
SLC6A4P31645 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SLC6A4P31645 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
SLC6A4P31645 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.8□□□□□ -1.64
SLC6A4P31645 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SLC6A4P31645 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SLC6A4P31645 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.8□□□□□ -1.64
SLC6A4P31645 AL031119.1-201ENST00000404707 1879 ntBASIC4.8□□□□□ -1.64
SLC6A4P31645 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SLC6A4P31645 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SLC6A4P31645 OR4K15-201ENST00000305051 1216 ntBASIC4.8□□□□□ -1.64
SLC6A4P31645 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SLC6A4P31645 Y_RNA.582-201ENST00000391023 95 ntBASIC4.8□□□□□ -1.64
SLC6A4P31645 DSTNP4-201ENST00000399472 474 ntBASIC4.8□□□□□ -1.64
SLC6A4P31645 AP000580.1-201ENST00000404439 358 ntBASIC4.8□□□□□ -1.64
SLC6A4P31645 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.8□□□□□ -1.64
SLC6A4P31645 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.8□□□□□ -1.64
SLC6A4P31645 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.8□□□□□ -1.64
SLC6A4P31645 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.8□□□□□ -1.64
SLC6A4P31645 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.8□□□□□ -1.64
SLC6A4P31645 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.8□□□□□ -1.64
SLC6A4P31645 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.8□□□□□ -1.64
SLC6A4P31645 AL031667.1-201ENST00000440222 725 ntBASIC4.8□□□□□ -1.64
SLC6A4P31645 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SLC6A4P31645 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.8□□□□□ -1.64
SLC6A4P31645 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.8□□□□□ -1.64
SLC6A4P31645 AL033528.1-201ENST00000453780 140 ntBASIC4.8□□□□□ -1.64
SLC6A4P31645 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.8□□□□□ -1.64
SLC6A4P31645 snoU109.1-201ENST00000459339 135 ntBASIC4.8□□□□□ -1.64
SLC6A4P31645 AP000893.1-201ENST00000474462 794 ntBASIC4.8□□□□□ -1.64
SLC6A4P31645 AC025164.1-201ENST00000496249 478 ntBASIC4.8□□□□□ -1.64
SLC6A4P31645 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.8□□□□□ -1.64
SLC6A4P31645 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.8□□□□□ -1.64
SLC6A4P31645 AC007016.1-201ENST00000512110 244 ntBASIC4.8□□□□□ -1.64
SLC6A4P31645 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.8□□□□□ -1.64
SLC6A4P31645 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.8□□□□□ -1.64
SLC6A4P31645 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.8□□□□□ -1.64
SLC6A4P31645 ZNF705CP-201ENST00000530515 889 ntBASIC4.8□□□□□ -1.64
SLC6A4P31645 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.8□□□□□ -1.64
SLC6A4P31645 LSM6P2-201ENST00000552208 177 ntBASIC4.8□□□□□ -1.64
SLC6A4P31645 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.8□□□□□ -1.64
SLC6A4P31645 AC009063.1-201ENST00000563342 702 ntBASIC4.8□□□□□ -1.64
SLC6A4P31645 EIF5A2P1-201ENST00000564027 460 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms