Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
H2afb1S4R1E0 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb1S4R1E0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb1S4R1E0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb1S4R1E0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb1S4R1E0 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb1S4R1E0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb1S4R1E0 Gm7638-201ENSMUST00000121348 967 ntBASIC14.94□□□□□ -0.02
H2afb1S4R1E0 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb1S4R1E0 Gm38027-201ENSMUST00000192315 235 ntBASIC14.94□□□□□ -0.02
H2afb1S4R1E0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.94□□□□□ -0.02
H2afb1S4R1E0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.94□□□□□ -0.02
H2afb1S4R1E0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb1S4R1E0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb1S4R1E0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb1S4R1E0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb1S4R1E0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb1S4R1E0 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb1S4R1E0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb1S4R1E0 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb1S4R1E0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb1S4R1E0 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb1S4R1E0 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.94□□□□□ -0.02
H2afb1S4R1E0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb1S4R1E0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb1S4R1E0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb1S4R1E0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb1S4R1E0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
H2afb1S4R1E0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb1S4R1E0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb1S4R1E0 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
H2afb1S4R1E0 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.93□□□□□ -0.02
H2afb1S4R1E0 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
H2afb1S4R1E0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb1S4R1E0 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb1S4R1E0 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb1S4R1E0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb1S4R1E0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb1S4R1E0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.93□□□□□ -0.02
H2afb1S4R1E0 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.93□□□□□ -0.02
H2afb1S4R1E0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb1S4R1E0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.93□□□□□ -0.02
H2afb1S4R1E0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb1S4R1E0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb1S4R1E0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb1S4R1E0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb1S4R1E0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb1S4R1E0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb1S4R1E0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb1S4R1E0 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
H2afb1S4R1E0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb1S4R1E0 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb1S4R1E0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb1S4R1E0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb1S4R1E0 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb1S4R1E0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb1S4R1E0 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb1S4R1E0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb1S4R1E0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb1S4R1E0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
H2afb1S4R1E0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.92□□□□□ -0.02
H2afb1S4R1E0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb1S4R1E0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.92□□□□□ -0.02
H2afb1S4R1E0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
H2afb1S4R1E0 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb1S4R1E0 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb1S4R1E0 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb1S4R1E0 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb1S4R1E0 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
H2afb1S4R1E0 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb1S4R1E0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb1S4R1E0 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
H2afb1S4R1E0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb1S4R1E0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb1S4R1E0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
H2afb1S4R1E0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb1S4R1E0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb1S4R1E0 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb1S4R1E0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb1S4R1E0 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb1S4R1E0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.91□□□□□ -0.02
H2afb1S4R1E0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb1S4R1E0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb1S4R1E0 Mir1199-201ENSMUST00000117015 119 ntBASIC14.91□□□□□ -0.02
H2afb1S4R1E0 Gm13168-201ENSMUST00000121771 632 ntBASIC14.91□□□□□ -0.02
H2afb1S4R1E0 Gm10653-202ENSMUST00000139570 835 ntBASIC14.91□□□□□ -0.02
H2afb1S4R1E0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
H2afb1S4R1E0 Gm18958-201ENSMUST00000174258 762 ntBASIC14.91□□□□□ -0.02
H2afb1S4R1E0 Il3ra-202ENSMUST00000223589 738 ntBASIC14.91□□□□□ -0.02
H2afb1S4R1E0 Timm23-208ENSMUST00000226683 750 ntBASIC14.91□□□□□ -0.02
H2afb1S4R1E0 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.91□□□□□ -0.02
H2afb1S4R1E0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
H2afb1S4R1E0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb1S4R1E0 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb1S4R1E0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb1S4R1E0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
H2afb1S4R1E0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb1S4R1E0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb1S4R1E0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb1S4R1E0 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms