Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmg20bQ9Z104 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmg20bQ9Z104 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmg20bQ9Z104 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmg20bQ9Z104 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Hmg20bQ9Z104 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmg20bQ9Z104 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Hmg20bQ9Z104 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Hmg20bQ9Z104 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.42■□□□□ 0.7
Hmg20bQ9Z104 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmg20bQ9Z104 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmg20bQ9Z104 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Hmg20bQ9Z104 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmg20bQ9Z104 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Hmg20bQ9Z104 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Hmg20bQ9Z104 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hmg20bQ9Z104 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.42■□□□□ 0.7
Hmg20bQ9Z104 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.42■□□□□ 0.7
Hmg20bQ9Z104 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Hmg20bQ9Z104 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmg20bQ9Z104 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmg20bQ9Z104 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Hmg20bQ9Z104 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Hmg20bQ9Z104 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmg20bQ9Z104 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Hmg20bQ9Z104 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Hmg20bQ9Z104 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmg20bQ9Z104 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmg20bQ9Z104 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmg20bQ9Z104 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmg20bQ9Z104 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.41■□□□□ 0.7
Hmg20bQ9Z104 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hmg20bQ9Z104 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmg20bQ9Z104 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hmg20bQ9Z104 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Hmg20bQ9Z104 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.41■□□□□ 0.7
Hmg20bQ9Z104 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.41■□□□□ 0.7
Hmg20bQ9Z104 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Hmg20bQ9Z104 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmg20bQ9Z104 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmg20bQ9Z104 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.41■□□□□ 0.7
Hmg20bQ9Z104 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmg20bQ9Z104 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmg20bQ9Z104 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmg20bQ9Z104 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Hmg20bQ9Z104 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmg20bQ9Z104 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.41■□□□□ 0.7
Hmg20bQ9Z104 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hmg20bQ9Z104 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmg20bQ9Z104 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Hmg20bQ9Z104 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmg20bQ9Z104 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmg20bQ9Z104 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmg20bQ9Z104 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hmg20bQ9Z104 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.4■□□□□ 0.7
Hmg20bQ9Z104 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hmg20bQ9Z104 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmg20bQ9Z104 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmg20bQ9Z104 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.4■□□□□ 0.7
Hmg20bQ9Z104 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmg20bQ9Z104 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmg20bQ9Z104 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmg20bQ9Z104 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hmg20bQ9Z104 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hmg20bQ9Z104 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hmg20bQ9Z104 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hmg20bQ9Z104 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hmg20bQ9Z104 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hmg20bQ9Z104 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Hmg20bQ9Z104 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.39■□□□□ 0.69
Hmg20bQ9Z104 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.39■□□□□ 0.69
Hmg20bQ9Z104 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hmg20bQ9Z104 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.39■□□□□ 0.69
Hmg20bQ9Z104 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hmg20bQ9Z104 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hmg20bQ9Z104 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hmg20bQ9Z104 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hmg20bQ9Z104 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Hmg20bQ9Z104 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hmg20bQ9Z104 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hmg20bQ9Z104 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Hmg20bQ9Z104 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hmg20bQ9Z104 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hmg20bQ9Z104 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hmg20bQ9Z104 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hmg20bQ9Z104 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.38■□□□□ 0.69
Hmg20bQ9Z104 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.38■□□□□ 0.69
Hmg20bQ9Z104 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hmg20bQ9Z104 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.38■□□□□ 0.69
Hmg20bQ9Z104 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hmg20bQ9Z104 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.38■□□□□ 0.69
Hmg20bQ9Z104 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Hmg20bQ9Z104 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Hmg20bQ9Z104 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hmg20bQ9Z104 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Hmg20bQ9Z104 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.38■□□□□ 0.69
Hmg20bQ9Z104 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Hmg20bQ9Z104 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.38■□□□□ 0.69
Hmg20bQ9Z104 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hmg20bQ9Z104 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms