Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn8aQ9WTU3 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn8aQ9WTU3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Scn8aQ9WTU3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Scn8aQ9WTU3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.5■□□□□ 0.23
Scn8aQ9WTU3 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Scn8aQ9WTU3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn8aQ9WTU3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Scn8aQ9WTU3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Scn8aQ9WTU3 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn8aQ9WTU3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Scn8aQ9WTU3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn8aQ9WTU3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn8aQ9WTU3 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn8aQ9WTU3 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.49■□□□□ 0.23
Scn8aQ9WTU3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn8aQ9WTU3 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Scn8aQ9WTU3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.49■□□□□ 0.23
Scn8aQ9WTU3 Gm4459-201ENSMUST00000118750 468 ntBASIC16.49■□□□□ 0.23
Scn8aQ9WTU3 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.49■□□□□ 0.23
Scn8aQ9WTU3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn8aQ9WTU3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn8aQ9WTU3 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn8aQ9WTU3 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Scn8aQ9WTU3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn8aQ9WTU3 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Scn8aQ9WTU3 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Scn8aQ9WTU3 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn8aQ9WTU3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn8aQ9WTU3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn8aQ9WTU3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn8aQ9WTU3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Scn8aQ9WTU3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn8aQ9WTU3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn8aQ9WTU3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn8aQ9WTU3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn8aQ9WTU3 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.49■□□□□ 0.23
Scn8aQ9WTU3 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.49■□□□□ 0.23
Scn8aQ9WTU3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn8aQ9WTU3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn8aQ9WTU3 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.49■□□□□ 0.23
Scn8aQ9WTU3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn8aQ9WTU3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Scn8aQ9WTU3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn8aQ9WTU3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Scn8aQ9WTU3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn8aQ9WTU3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn8aQ9WTU3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Scn8aQ9WTU3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.48■□□□□ 0.23
Scn8aQ9WTU3 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.48■□□□□ 0.23
Scn8aQ9WTU3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn8aQ9WTU3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn8aQ9WTU3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn8aQ9WTU3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn8aQ9WTU3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn8aQ9WTU3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn8aQ9WTU3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn8aQ9WTU3 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.48■□□□□ 0.23
Scn8aQ9WTU3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn8aQ9WTU3 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.47■□□□□ 0.23
Scn8aQ9WTU3 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn8aQ9WTU3 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn8aQ9WTU3 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scn8aQ9WTU3 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Scn8aQ9WTU3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn8aQ9WTU3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn8aQ9WTU3 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn8aQ9WTU3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Scn8aQ9WTU3 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Scn8aQ9WTU3 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn8aQ9WTU3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scn8aQ9WTU3 Mir8098-201ENSMUST00000184011 137 ntBASIC16.47■□□□□ 0.23
Scn8aQ9WTU3 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.47■□□□□ 0.23
Scn8aQ9WTU3 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.47■□□□□ 0.23
Scn8aQ9WTU3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn8aQ9WTU3 Rps4l-201ENSMUST00000071745 943 ntBASIC16.47■□□□□ 0.23
Scn8aQ9WTU3 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn8aQ9WTU3 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn8aQ9WTU3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.47■□□□□ 0.23
Scn8aQ9WTU3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scn8aQ9WTU3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Scn8aQ9WTU3 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scn8aQ9WTU3 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.46■□□□□ 0.23
Scn8aQ9WTU3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn8aQ9WTU3 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.46■□□□□ 0.23
Scn8aQ9WTU3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn8aQ9WTU3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn8aQ9WTU3 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn8aQ9WTU3 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scn8aQ9WTU3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scn8aQ9WTU3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Scn8aQ9WTU3 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.46■□□□□ 0.23
Scn8aQ9WTU3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Scn8aQ9WTU3 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Scn8aQ9WTU3 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Scn8aQ9WTU3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Scn8aQ9WTU3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.46■□□□□ 0.22
Scn8aQ9WTU3 Mir5126-201ENSMUST00000175513 77 ntBASIC16.46■□□□□ 0.22
Scn8aQ9WTU3 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
Scn8aQ9WTU3 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.46■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms