Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.38□□□□□ -0.11
Nubp1Q9R060 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nubp1Q9R060 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nubp1Q9R060 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Nubp1Q9R060 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nubp1Q9R060 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Gm37648-201ENSMUST00000192072 2563 ntBASIC14.37□□□□□ -0.11
Nubp1Q9R060 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.37□□□□□ -0.11
Nubp1Q9R060 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nubp1Q9R060 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nubp1Q9R060 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nubp1Q9R060 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.37□□□□□ -0.11
Nubp1Q9R060 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.37□□□□□ -0.11
Nubp1Q9R060 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Gm45878-201ENSMUST00000211839 241 ntBASIC14.37□□□□□ -0.11
Nubp1Q9R060 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nubp1Q9R060 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nubp1Q9R060 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Nubp1Q9R060 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Nubp1Q9R060 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nubp1Q9R060 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nubp1Q9R060 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.36□□□□□ -0.11
Nubp1Q9R060 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.36□□□□□ -0.11
Nubp1Q9R060 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nubp1Q9R060 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nubp1Q9R060 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nubp1Q9R060 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.36□□□□□ -0.11
Nubp1Q9R060 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nubp1Q9R060 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.36□□□□□ -0.11
Nubp1Q9R060 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nubp1Q9R060 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.36□□□□□ -0.11
Nubp1Q9R060 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Nubp1Q9R060 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.36□□□□□ -0.11
Nubp1Q9R060 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nubp1Q9R060 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nubp1Q9R060 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nubp1Q9R060 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nubp1Q9R060 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.36□□□□□ -0.11
Nubp1Q9R060 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nubp1Q9R060 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nubp1Q9R060 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nubp1Q9R060 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nubp1Q9R060 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nubp1Q9R060 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nubp1Q9R060 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Nubp1Q9R060 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp1Q9R060 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp1Q9R060 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp1Q9R060 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp1Q9R060 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nubp1Q9R060 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp1Q9R060 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp1Q9R060 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp1Q9R060 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp1Q9R060 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp1Q9R060 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.35□□□□□ -0.11
Nubp1Q9R060 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp1Q9R060 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.35□□□□□ -0.11
Nubp1Q9R060 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.35□□□□□ -0.11
Nubp1Q9R060 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Nubp1Q9R060 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp1Q9R060 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.35□□□□□ -0.11
Nubp1Q9R060 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC14.35□□□□□ -0.11
Nubp1Q9R060 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC14.35□□□□□ -0.11
Nubp1Q9R060 AC114573.1-201ENSMUST00000224120 1210 ntBASIC14.35□□□□□ -0.11
Nubp1Q9R060 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp1Q9R060 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp1Q9R060 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp1Q9R060 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp1Q9R060 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Nubp1Q9R060 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms