Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom3Q9QXN0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom3Q9QXN0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom3Q9QXN0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom3Q9QXN0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom3Q9QXN0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom3Q9QXN0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom3Q9QXN0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom3Q9QXN0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom3Q9QXN0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.46■□□□□ 0.23
Shroom3Q9QXN0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Shroom3Q9QXN0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom3Q9QXN0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.46■□□□□ 0.23
Shroom3Q9QXN0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom3Q9QXN0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Shroom3Q9QXN0 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom3Q9QXN0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom3Q9QXN0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom3Q9QXN0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom3Q9QXN0 Gm24589-201ENSMUST00000116692 94 ntBASIC16.46■□□□□ 0.22
Shroom3Q9QXN0 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.46■□□□□ 0.22
Shroom3Q9QXN0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.46■□□□□ 0.22
Shroom3Q9QXN0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.46■□□□□ 0.22
Shroom3Q9QXN0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Shroom3Q9QXN0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Shroom3Q9QXN0 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom3Q9QXN0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.45■□□□□ 0.22
Shroom3Q9QXN0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom3Q9QXN0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.45■□□□□ 0.22
Shroom3Q9QXN0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom3Q9QXN0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom3Q9QXN0 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom3Q9QXN0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom3Q9QXN0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom3Q9QXN0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Shroom3Q9QXN0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.45■□□□□ 0.22
Shroom3Q9QXN0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom3Q9QXN0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.45■□□□□ 0.22
Shroom3Q9QXN0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom3Q9QXN0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Shroom3Q9QXN0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom3Q9QXN0 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom3Q9QXN0 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom3Q9QXN0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Shroom3Q9QXN0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom3Q9QXN0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Shroom3Q9QXN0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom3Q9QXN0 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Shroom3Q9QXN0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom3Q9QXN0 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom3Q9QXN0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom3Q9QXN0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom3Q9QXN0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Shroom3Q9QXN0 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Shroom3Q9QXN0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom3Q9QXN0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
Shroom3Q9QXN0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom3Q9QXN0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.44■□□□□ 0.22
Shroom3Q9QXN0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom3Q9QXN0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom3Q9QXN0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom3Q9QXN0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom3Q9QXN0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom3Q9QXN0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom3Q9QXN0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom3Q9QXN0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom3Q9QXN0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Shroom3Q9QXN0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom3Q9QXN0 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom3Q9QXN0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom3Q9QXN0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom3Q9QXN0 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.44■□□□□ 0.22
Shroom3Q9QXN0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom3Q9QXN0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom3Q9QXN0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom3Q9QXN0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.44■□□□□ 0.22
Shroom3Q9QXN0 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.43■□□□□ 0.22
Shroom3Q9QXN0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.43■□□□□ 0.22
Shroom3Q9QXN0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Shroom3Q9QXN0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom3Q9QXN0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.43■□□□□ 0.22
Shroom3Q9QXN0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.43■□□□□ 0.22
Shroom3Q9QXN0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom3Q9QXN0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom3Q9QXN0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom3Q9QXN0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Shroom3Q9QXN0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom3Q9QXN0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Shroom3Q9QXN0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.43■□□□□ 0.22
Shroom3Q9QXN0 Mir3081-201ENSMUST00000175305 84 ntBASIC16.43■□□□□ 0.22
Shroom3Q9QXN0 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.43■□□□□ 0.22
Shroom3Q9QXN0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.43■□□□□ 0.22
Shroom3Q9QXN0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom3Q9QXN0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom3Q9QXN0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom3Q9QXN0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Shroom3Q9QXN0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom3Q9QXN0 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom3Q9QXN0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shroom3Q9QXN0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms