Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh5Q9QUM7 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh5Q9QUM7 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Msh5Q9QUM7 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Msh5Q9QUM7 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh5Q9QUM7 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Msh5Q9QUM7 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.83■□□□□ 0.29
Msh5Q9QUM7 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msh5Q9QUM7 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.83■□□□□ 0.28
Msh5Q9QUM7 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msh5Q9QUM7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Msh5Q9QUM7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msh5Q9QUM7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msh5Q9QUM7 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Msh5Q9QUM7 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Msh5Q9QUM7 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msh5Q9QUM7 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msh5Q9QUM7 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msh5Q9QUM7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msh5Q9QUM7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msh5Q9QUM7 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msh5Q9QUM7 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Msh5Q9QUM7 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msh5Q9QUM7 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Msh5Q9QUM7 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msh5Q9QUM7 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msh5Q9QUM7 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msh5Q9QUM7 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh5Q9QUM7 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh5Q9QUM7 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.82■□□□□ 0.28
Msh5Q9QUM7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh5Q9QUM7 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Msh5Q9QUM7 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.82■□□□□ 0.28
Msh5Q9QUM7 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh5Q9QUM7 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh5Q9QUM7 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh5Q9QUM7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh5Q9QUM7 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh5Q9QUM7 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Msh5Q9QUM7 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh5Q9QUM7 Gm12439-201ENSMUST00000117162 365 ntBASIC16.82■□□□□ 0.28
Msh5Q9QUM7 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Msh5Q9QUM7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Msh5Q9QUM7 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh5Q9QUM7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.82■□□□□ 0.28
Msh5Q9QUM7 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh5Q9QUM7 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh5Q9QUM7 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh5Q9QUM7 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh5Q9QUM7 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh5Q9QUM7 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Msh5Q9QUM7 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh5Q9QUM7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh5Q9QUM7 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Msh5Q9QUM7 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh5Q9QUM7 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh5Q9QUM7 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh5Q9QUM7 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh5Q9QUM7 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.81■□□□□ 0.28
Msh5Q9QUM7 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh5Q9QUM7 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh5Q9QUM7 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Msh5Q9QUM7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Msh5Q9QUM7 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
Msh5Q9QUM7 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh5Q9QUM7 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.81■□□□□ 0.28
Msh5Q9QUM7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh5Q9QUM7 Gm27000-201ENSMUST00000182943 842 ntBASIC16.81■□□□□ 0.28
Msh5Q9QUM7 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Msh5Q9QUM7 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Msh5Q9QUM7 Gm9731-201ENSMUST00000209480 747 ntBASIC16.81■□□□□ 0.28
Msh5Q9QUM7 Gm30025-201ENSMUST00000218555 728 ntBASIC16.81■□□□□ 0.28
Msh5Q9QUM7 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.81■□□□□ 0.28
Msh5Q9QUM7 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh5Q9QUM7 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh5Q9QUM7 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh5Q9QUM7 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh5Q9QUM7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Msh5Q9QUM7 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Msh5Q9QUM7 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
Msh5Q9QUM7 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh5Q9QUM7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Msh5Q9QUM7 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh5Q9QUM7 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh5Q9QUM7 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh5Q9QUM7 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh5Q9QUM7 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh5Q9QUM7 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Msh5Q9QUM7 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh5Q9QUM7 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Msh5Q9QUM7 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh5Q9QUM7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.8■□□□□ 0.28
Msh5Q9QUM7 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.8■□□□□ 0.28
Msh5Q9QUM7 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh5Q9QUM7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh5Q9QUM7 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh5Q9QUM7 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Msh5Q9QUM7 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh5Q9QUM7 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.8■□□□□ 0.28
Msh5Q9QUM7 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms