Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Herpud1Q9JJK5 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Herpud1Q9JJK5 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Herpud1Q9JJK5 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Herpud1Q9JJK5 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Herpud1Q9JJK5 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Herpud1Q9JJK5 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
Herpud1Q9JJK5 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Herpud1Q9JJK5 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Herpud1Q9JJK5 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.71□□□□□ -0.22
Herpud1Q9JJK5 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.71□□□□□ -0.22
Herpud1Q9JJK5 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Herpud1Q9JJK5 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Herpud1Q9JJK5 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Herpud1Q9JJK5 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Herpud1Q9JJK5 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Herpud1Q9JJK5 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Herpud1Q9JJK5 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Herpud1Q9JJK5 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Herpud1Q9JJK5 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Herpud1Q9JJK5 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Herpud1Q9JJK5 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Herpud1Q9JJK5 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Herpud1Q9JJK5 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Herpud1Q9JJK5 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Herpud1Q9JJK5 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Herpud1Q9JJK5 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Herpud1Q9JJK5 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Herpud1Q9JJK5 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Herpud1Q9JJK5 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.69□□□□□ -0.22
Herpud1Q9JJK5 Gm21814-202ENSMUST00000203277 873 ntBASIC13.69□□□□□ -0.22
Herpud1Q9JJK5 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.69□□□□□ -0.22
Herpud1Q9JJK5 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Herpud1Q9JJK5 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Herpud1Q9JJK5 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Herpud1Q9JJK5 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Herpud1Q9JJK5 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Herpud1Q9JJK5 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.69□□□□□ -0.22
Herpud1Q9JJK5 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Herpud1Q9JJK5 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Herpud1Q9JJK5 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Herpud1Q9JJK5 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Herpud1Q9JJK5 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.68□□□□□ -0.22
Herpud1Q9JJK5 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Herpud1Q9JJK5 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Herpud1Q9JJK5 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Herpud1Q9JJK5 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Herpud1Q9JJK5 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Herpud1Q9JJK5 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Herpud1Q9JJK5 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Herpud1Q9JJK5 Mir5122-201ENSMUST00000175004 89 ntBASIC13.68□□□□□ -0.22
Herpud1Q9JJK5 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.68□□□□□ -0.22
Herpud1Q9JJK5 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.68□□□□□ -0.22
Herpud1Q9JJK5 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Herpud1Q9JJK5 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Herpud1Q9JJK5 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Herpud1Q9JJK5 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Herpud1Q9JJK5 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Herpud1Q9JJK5 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Herpud1Q9JJK5 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Herpud1Q9JJK5 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Herpud1Q9JJK5 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Herpud1Q9JJK5 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Herpud1Q9JJK5 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.67□□□□□ -0.22
Herpud1Q9JJK5 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms