Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ube3bQ9ES34 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ube3bQ9ES34 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.52■□□□□ 0.72
Ube3bQ9ES34 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ube3bQ9ES34 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.52■□□□□ 0.72
Ube3bQ9ES34 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.52■□□□□ 0.72
Ube3bQ9ES34 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.52■□□□□ 0.72
Ube3bQ9ES34 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.52■□□□□ 0.72
Ube3bQ9ES34 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Ube3bQ9ES34 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ube3bQ9ES34 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ube3bQ9ES34 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ube3bQ9ES34 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ube3bQ9ES34 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ube3bQ9ES34 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Ube3bQ9ES34 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ube3bQ9ES34 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ube3bQ9ES34 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ube3bQ9ES34 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ube3bQ9ES34 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ube3bQ9ES34 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.51■□□□□ 0.71
Ube3bQ9ES34 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ube3bQ9ES34 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ube3bQ9ES34 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.51■□□□□ 0.71
Ube3bQ9ES34 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ube3bQ9ES34 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ube3bQ9ES34 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ube3bQ9ES34 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ube3bQ9ES34 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ube3bQ9ES34 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ube3bQ9ES34 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ube3bQ9ES34 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ube3bQ9ES34 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ube3bQ9ES34 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ube3bQ9ES34 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ube3bQ9ES34 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ube3bQ9ES34 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ube3bQ9ES34 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Ube3bQ9ES34 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ube3bQ9ES34 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.5■□□□□ 0.71
Ube3bQ9ES34 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Ube3bQ9ES34 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ube3bQ9ES34 Gm15165-201ENSMUST00000118140 502 ntBASIC19.5■□□□□ 0.71
Ube3bQ9ES34 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.5■□□□□ 0.71
Ube3bQ9ES34 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ube3bQ9ES34 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
Ube3bQ9ES34 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Ube3bQ9ES34 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ube3bQ9ES34 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ube3bQ9ES34 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ube3bQ9ES34 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ube3bQ9ES34 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Ube3bQ9ES34 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ube3bQ9ES34 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ube3bQ9ES34 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ube3bQ9ES34 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.49■□□□□ 0.71
Ube3bQ9ES34 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ube3bQ9ES34 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ube3bQ9ES34 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ube3bQ9ES34 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ube3bQ9ES34 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ube3bQ9ES34 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ube3bQ9ES34 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ube3bQ9ES34 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.49■□□□□ 0.71
Ube3bQ9ES34 Gm27459-201ENSMUST00000184860 107 ntBASIC19.49■□□□□ 0.71
Ube3bQ9ES34 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.49■□□□□ 0.71
Ube3bQ9ES34 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ube3bQ9ES34 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ube3bQ9ES34 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.49■□□□□ 0.71
Ube3bQ9ES34 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ube3bQ9ES34 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ube3bQ9ES34 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Ube3bQ9ES34 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Ube3bQ9ES34 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ube3bQ9ES34 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ube3bQ9ES34 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ube3bQ9ES34 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ube3bQ9ES34 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ube3bQ9ES34 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Ube3bQ9ES34 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ube3bQ9ES34 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Ube3bQ9ES34 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.48■□□□□ 0.71
Ube3bQ9ES34 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.48■□□□□ 0.71
Ube3bQ9ES34 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.48■□□□□ 0.71
Ube3bQ9ES34 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.48■□□□□ 0.71
Ube3bQ9ES34 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.48■□□□□ 0.71
Ube3bQ9ES34 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Ube3bQ9ES34 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ube3bQ9ES34 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ube3bQ9ES34 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ube3bQ9ES34 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ube3bQ9ES34 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.48■□□□□ 0.71
Ube3bQ9ES34 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ube3bQ9ES34 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Ube3bQ9ES34 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Ube3bQ9ES34 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.47■□□□□ 0.71
Ube3bQ9ES34 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ube3bQ9ES34 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.47■□□□□ 0.71
Ube3bQ9ES34 Gm27867-201ENSMUST00000184778 125 ntBASIC19.47■□□□□ 0.71
Ube3bQ9ES34 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms