Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps35Q9EQH3 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps35Q9EQH3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Vps35Q9EQH3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps35Q9EQH3 Gm11355-201ENSMUST00000121120 306 ntBASIC16.48■□□□□ 0.23
Vps35Q9EQH3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vps35Q9EQH3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vps35Q9EQH3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.48■□□□□ 0.23
Vps35Q9EQH3 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps35Q9EQH3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps35Q9EQH3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps35Q9EQH3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Vps35Q9EQH3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps35Q9EQH3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps35Q9EQH3 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vps35Q9EQH3 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vps35Q9EQH3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vps35Q9EQH3 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps35Q9EQH3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps35Q9EQH3 Phf7-203ENSMUST00000226565 1971 ntBASIC16.47■□□□□ 0.23
Vps35Q9EQH3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vps35Q9EQH3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vps35Q9EQH3 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Vps35Q9EQH3 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps35Q9EQH3 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vps35Q9EQH3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Vps35Q9EQH3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vps35Q9EQH3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps35Q9EQH3 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vps35Q9EQH3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.47■□□□□ 0.23
Vps35Q9EQH3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps35Q9EQH3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Vps35Q9EQH3 Gm23634-201ENSMUST00000175071 91 ntBASIC16.47■□□□□ 0.23
Vps35Q9EQH3 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.47■□□□□ 0.23
Vps35Q9EQH3 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vps35Q9EQH3 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.47■□□□□ 0.23
Vps35Q9EQH3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps35Q9EQH3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Vps35Q9EQH3 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.47■□□□□ 0.23
Vps35Q9EQH3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps35Q9EQH3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.47■□□□□ 0.23
Vps35Q9EQH3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.47■□□□□ 0.23
Vps35Q9EQH3 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps35Q9EQH3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps35Q9EQH3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps35Q9EQH3 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Vps35Q9EQH3 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps35Q9EQH3 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vps35Q9EQH3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps35Q9EQH3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps35Q9EQH3 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps35Q9EQH3 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.46■□□□□ 0.23
Vps35Q9EQH3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Vps35Q9EQH3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Vps35Q9EQH3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Vps35Q9EQH3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps35Q9EQH3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps35Q9EQH3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.46■□□□□ 0.23
Vps35Q9EQH3 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps35Q9EQH3 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps35Q9EQH3 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps35Q9EQH3 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps35Q9EQH3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Vps35Q9EQH3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Vps35Q9EQH3 Gm9013-201ENSMUST00000132939 882 ntBASIC16.46■□□□□ 0.23
Vps35Q9EQH3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.46■□□□□ 0.23
Vps35Q9EQH3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Vps35Q9EQH3 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
Vps35Q9EQH3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps35Q9EQH3 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps35Q9EQH3 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Vps35Q9EQH3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps35Q9EQH3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps35Q9EQH3 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps35Q9EQH3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Vps35Q9EQH3 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.46■□□□□ 0.23
Vps35Q9EQH3 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps35Q9EQH3 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.46■□□□□ 0.23
Vps35Q9EQH3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Vps35Q9EQH3 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.45■□□□□ 0.22
Vps35Q9EQH3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Vps35Q9EQH3 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps35Q9EQH3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Vps35Q9EQH3 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps35Q9EQH3 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.45■□□□□ 0.22
Vps35Q9EQH3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps35Q9EQH3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Vps35Q9EQH3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.45■□□□□ 0.22
Vps35Q9EQH3 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vps35Q9EQH3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Vps35Q9EQH3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps35Q9EQH3 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps35Q9EQH3 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps35Q9EQH3 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps35Q9EQH3 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps35Q9EQH3 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps35Q9EQH3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps35Q9EQH3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps35Q9EQH3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps35Q9EQH3 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms