Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4cQ9D7F7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4cQ9D7F7 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Chmp4cQ9D7F7 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4cQ9D7F7 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
Chmp4cQ9D7F7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp4cQ9D7F7 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Chmp4cQ9D7F7 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp4cQ9D7F7 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp4cQ9D7F7 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Chmp4cQ9D7F7 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.7■□□□□ 0.74
Chmp4cQ9D7F7 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.7■□□□□ 0.74
Chmp4cQ9D7F7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Chmp4cQ9D7F7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.7■□□□□ 0.74
Chmp4cQ9D7F7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp4cQ9D7F7 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp4cQ9D7F7 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Chmp4cQ9D7F7 Gm5417-201ENSMUST00000079706 384 ntBASIC19.7■□□□□ 0.74
Chmp4cQ9D7F7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Chmp4cQ9D7F7 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp4cQ9D7F7 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp4cQ9D7F7 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp4cQ9D7F7 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp4cQ9D7F7 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp4cQ9D7F7 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp4cQ9D7F7 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp4cQ9D7F7 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp4cQ9D7F7 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp4cQ9D7F7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp4cQ9D7F7 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp4cQ9D7F7 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Chmp4cQ9D7F7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.69■□□□□ 0.74
Chmp4cQ9D7F7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp4cQ9D7F7 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.69■□□□□ 0.74
Chmp4cQ9D7F7 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp4cQ9D7F7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp4cQ9D7F7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp4cQ9D7F7 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Chmp4cQ9D7F7 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp4cQ9D7F7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp4cQ9D7F7 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Chmp4cQ9D7F7 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp4cQ9D7F7 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp4cQ9D7F7 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp4cQ9D7F7 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp4cQ9D7F7 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp4cQ9D7F7 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Chmp4cQ9D7F7 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp4cQ9D7F7 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp4cQ9D7F7 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Chmp4cQ9D7F7 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp4cQ9D7F7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Chmp4cQ9D7F7 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp4cQ9D7F7 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp4cQ9D7F7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp4cQ9D7F7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp4cQ9D7F7 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Chmp4cQ9D7F7 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.68■□□□□ 0.74
Chmp4cQ9D7F7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
Chmp4cQ9D7F7 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp4cQ9D7F7 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp4cQ9D7F7 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Chmp4cQ9D7F7 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp4cQ9D7F7 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp4cQ9D7F7 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp4cQ9D7F7 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp4cQ9D7F7 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp4cQ9D7F7 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp4cQ9D7F7 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp4cQ9D7F7 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Chmp4cQ9D7F7 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Chmp4cQ9D7F7 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.67■□□□□ 0.74
Chmp4cQ9D7F7 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp4cQ9D7F7 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp4cQ9D7F7 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp4cQ9D7F7 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp4cQ9D7F7 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC19.67■□□□□ 0.74
Chmp4cQ9D7F7 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Chmp4cQ9D7F7 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp4cQ9D7F7 Dancr-204ENSMUST00000132389 2347 ntBASIC19.67■□□□□ 0.74
Chmp4cQ9D7F7 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4cQ9D7F7 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4cQ9D7F7 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4cQ9D7F7 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.66■□□□□ 0.74
Chmp4cQ9D7F7 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4cQ9D7F7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4cQ9D7F7 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC19.66■□□□□ 0.74
Chmp4cQ9D7F7 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Chmp4cQ9D7F7 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4cQ9D7F7 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4cQ9D7F7 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4cQ9D7F7 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
Chmp4cQ9D7F7 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4cQ9D7F7 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4cQ9D7F7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.66■□□□□ 0.74
Chmp4cQ9D7F7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4cQ9D7F7 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.66■□□□□ 0.74
Chmp4cQ9D7F7 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.66■□□□□ 0.74
Chmp4cQ9D7F7 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.66■□□□□ 0.74
Chmp4cQ9D7F7 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms