Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps33aQ9D2N9 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps33aQ9D2N9 Gm45546-201ENSMUST00000211053 2394 ntBASIC17.5■□□□□ 0.39
Vps33aQ9D2N9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.5■□□□□ 0.39
Vps33aQ9D2N9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vps33aQ9D2N9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.5■□□□□ 0.39
Vps33aQ9D2N9 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.5■□□□□ 0.39
Vps33aQ9D2N9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.5■□□□□ 0.39
Vps33aQ9D2N9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vps33aQ9D2N9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Vps33aQ9D2N9 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vps33aQ9D2N9 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps33aQ9D2N9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps33aQ9D2N9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vps33aQ9D2N9 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps33aQ9D2N9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps33aQ9D2N9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps33aQ9D2N9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps33aQ9D2N9 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps33aQ9D2N9 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps33aQ9D2N9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps33aQ9D2N9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Vps33aQ9D2N9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps33aQ9D2N9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps33aQ9D2N9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
Vps33aQ9D2N9 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps33aQ9D2N9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
Vps33aQ9D2N9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.49■□□□□ 0.39
Vps33aQ9D2N9 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.49■□□□□ 0.39
Vps33aQ9D2N9 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.49■□□□□ 0.39
Vps33aQ9D2N9 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.49■□□□□ 0.39
Vps33aQ9D2N9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.49■□□□□ 0.39
Vps33aQ9D2N9 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps33aQ9D2N9 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.49■□□□□ 0.39
Vps33aQ9D2N9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps33aQ9D2N9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps33aQ9D2N9 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps33aQ9D2N9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Vps33aQ9D2N9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps33aQ9D2N9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Vps33aQ9D2N9 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps33aQ9D2N9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps33aQ9D2N9 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps33aQ9D2N9 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Vps33aQ9D2N9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps33aQ9D2N9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Vps33aQ9D2N9 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps33aQ9D2N9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps33aQ9D2N9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps33aQ9D2N9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps33aQ9D2N9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps33aQ9D2N9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps33aQ9D2N9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
Vps33aQ9D2N9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vps33aQ9D2N9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps33aQ9D2N9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vps33aQ9D2N9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.48■□□□□ 0.39
Vps33aQ9D2N9 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps33aQ9D2N9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Vps33aQ9D2N9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps33aQ9D2N9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps33aQ9D2N9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps33aQ9D2N9 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps33aQ9D2N9 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps33aQ9D2N9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps33aQ9D2N9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps33aQ9D2N9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.47■□□□□ 0.39
Vps33aQ9D2N9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vps33aQ9D2N9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps33aQ9D2N9 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps33aQ9D2N9 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Vps33aQ9D2N9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vps33aQ9D2N9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps33aQ9D2N9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vps33aQ9D2N9 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps33aQ9D2N9 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps33aQ9D2N9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.47■□□□□ 0.39
Vps33aQ9D2N9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Vps33aQ9D2N9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.47■□□□□ 0.39
Vps33aQ9D2N9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vps33aQ9D2N9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps33aQ9D2N9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vps33aQ9D2N9 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps33aQ9D2N9 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vps33aQ9D2N9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vps33aQ9D2N9 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.47■□□□□ 0.39
Vps33aQ9D2N9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Vps33aQ9D2N9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps33aQ9D2N9 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps33aQ9D2N9 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps33aQ9D2N9 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vps33aQ9D2N9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vps33aQ9D2N9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps33aQ9D2N9 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.46■□□□□ 0.39
Vps33aQ9D2N9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps33aQ9D2N9 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps33aQ9D2N9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps33aQ9D2N9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps33aQ9D2N9 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps33aQ9D2N9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 144.3 ms