Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim42Q9D2H5 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim42Q9D2H5 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim42Q9D2H5 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trim42Q9D2H5 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Trim42Q9D2H5 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Trim42Q9D2H5 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim42Q9D2H5 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
Trim42Q9D2H5 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trim42Q9D2H5 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim42Q9D2H5 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trim42Q9D2H5 Prob1-201ENSMUST00000097619 3021 ntBASIC16.48■□□□□ 0.23
Trim42Q9D2H5 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim42Q9D2H5 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim42Q9D2H5 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.48■□□□□ 0.23
Trim42Q9D2H5 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.48■□□□□ 0.23
Trim42Q9D2H5 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.48■□□□□ 0.23
Trim42Q9D2H5 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trim42Q9D2H5 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim42Q9D2H5 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim42Q9D2H5 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim42Q9D2H5 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Trim42Q9D2H5 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.48■□□□□ 0.23
Trim42Q9D2H5 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim42Q9D2H5 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.48■□□□□ 0.23
Trim42Q9D2H5 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trim42Q9D2H5 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trim42Q9D2H5 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trim42Q9D2H5 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim42Q9D2H5 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim42Q9D2H5 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trim42Q9D2H5 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim42Q9D2H5 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim42Q9D2H5 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim42Q9D2H5 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim42Q9D2H5 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim42Q9D2H5 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim42Q9D2H5 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trim42Q9D2H5 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Trim42Q9D2H5 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim42Q9D2H5 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.47■□□□□ 0.23
Trim42Q9D2H5 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim42Q9D2H5 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim42Q9D2H5 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim42Q9D2H5 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim42Q9D2H5 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim42Q9D2H5 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trim42Q9D2H5 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim42Q9D2H5 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim42Q9D2H5 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trim42Q9D2H5 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim42Q9D2H5 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trim42Q9D2H5 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trim42Q9D2H5 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim42Q9D2H5 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim42Q9D2H5 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim42Q9D2H5 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim42Q9D2H5 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim42Q9D2H5 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim42Q9D2H5 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim42Q9D2H5 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim42Q9D2H5 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trim42Q9D2H5 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim42Q9D2H5 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trim42Q9D2H5 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim42Q9D2H5 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim42Q9D2H5 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim42Q9D2H5 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim42Q9D2H5 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim42Q9D2H5 Gm26571-201ENSMUST00000181399 666 ntBASIC16.46■□□□□ 0.23
Trim42Q9D2H5 Gm42569-201ENSMUST00000200539 472 ntBASIC16.46■□□□□ 0.23
Trim42Q9D2H5 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim42Q9D2H5 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim42Q9D2H5 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim42Q9D2H5 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim42Q9D2H5 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.46■□□□□ 0.23
Trim42Q9D2H5 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Trim42Q9D2H5 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trim42Q9D2H5 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trim42Q9D2H5 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim42Q9D2H5 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim42Q9D2H5 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim42Q9D2H5 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim42Q9D2H5 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim42Q9D2H5 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
Trim42Q9D2H5 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim42Q9D2H5 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim42Q9D2H5 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim42Q9D2H5 Gm10849-201ENSMUST00000100397 618 ntBASIC16.45■□□□□ 0.22
Trim42Q9D2H5 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.45■□□□□ 0.22
Trim42Q9D2H5 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim42Q9D2H5 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim42Q9D2H5 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trim42Q9D2H5 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim42Q9D2H5 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim42Q9D2H5 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim42Q9D2H5 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim42Q9D2H5 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim42Q9D2H5 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim42Q9D2H5 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms