Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ndc80Q9D0F1 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.73■□□□□ 0.27
Ndc80Q9D0F1 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.73■□□□□ 0.27
Ndc80Q9D0F1 Mir5130-201ENSMUST00000175160 84 ntBASIC16.73■□□□□ 0.27
Ndc80Q9D0F1 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.73■□□□□ 0.27
Ndc80Q9D0F1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.73■□□□□ 0.27
Ndc80Q9D0F1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ndc80Q9D0F1 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ndc80Q9D0F1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ndc80Q9D0F1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ndc80Q9D0F1 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ndc80Q9D0F1 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ndc80Q9D0F1 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ndc80Q9D0F1 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ndc80Q9D0F1 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ndc80Q9D0F1 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ndc80Q9D0F1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ndc80Q9D0F1 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Gm7213-201ENSMUST00000215977 950 ntBASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc80Q9D0F1 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ndc80Q9D0F1 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ndc80Q9D0F1 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ndc80Q9D0F1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.71■□□□□ 0.27
Ndc80Q9D0F1 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ndc80Q9D0F1 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ndc80Q9D0F1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ndc80Q9D0F1 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.71■□□□□ 0.27
Ndc80Q9D0F1 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ndc80Q9D0F1 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ndc80Q9D0F1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ndc80Q9D0F1 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ndc80Q9D0F1 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ndc80Q9D0F1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ndc80Q9D0F1 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ndc80Q9D0F1 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ndc80Q9D0F1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ndc80Q9D0F1 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Ndc80Q9D0F1 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ndc80Q9D0F1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc80Q9D0F1 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc80Q9D0F1 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc80Q9D0F1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc80Q9D0F1 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.7■□□□□ 0.26
Ndc80Q9D0F1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc80Q9D0F1 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc80Q9D0F1 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc80Q9D0F1 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc80Q9D0F1 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.7■□□□□ 0.26
Ndc80Q9D0F1 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc80Q9D0F1 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc80Q9D0F1 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc80Q9D0F1 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc80Q9D0F1 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.7■□□□□ 0.26
Ndc80Q9D0F1 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc80Q9D0F1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc80Q9D0F1 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ndc80Q9D0F1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.7■□□□□ 0.26
Ndc80Q9D0F1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Ndc80Q9D0F1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ndc80Q9D0F1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc80Q9D0F1 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ndc80Q9D0F1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc80Q9D0F1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc80Q9D0F1 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ndc80Q9D0F1 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc80Q9D0F1 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc80Q9D0F1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc80Q9D0F1 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc80Q9D0F1 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms