Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Tlr3Q99MB1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tlr3Q99MB1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tlr3Q99MB1 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tlr3Q99MB1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tlr3Q99MB1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Tlr3Q99MB1 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tlr3Q99MB1 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tlr3Q99MB1 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tlr3Q99MB1 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Tlr3Q99MB1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tlr3Q99MB1 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Tlr3Q99MB1 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tlr3Q99MB1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tlr3Q99MB1 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Tlr3Q99MB1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tlr3Q99MB1 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tlr3Q99MB1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.66■□□□□ 0.42
Tlr3Q99MB1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Tlr3Q99MB1 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.66■□□□□ 0.42
Tlr3Q99MB1 Ank2-226ENSMUST00000189368 339 ntBASIC17.66■□□□□ 0.42
Tlr3Q99MB1 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tlr3Q99MB1 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.66■□□□□ 0.42
Tlr3Q99MB1 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Tlr3Q99MB1 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tlr3Q99MB1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tlr3Q99MB1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Tlr3Q99MB1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Tlr3Q99MB1 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tlr3Q99MB1 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tlr3Q99MB1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Tlr3Q99MB1 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Tlr3Q99MB1 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tlr3Q99MB1 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tlr3Q99MB1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Tlr3Q99MB1 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Tlr3Q99MB1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tlr3Q99MB1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tlr3Q99MB1 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tlr3Q99MB1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tlr3Q99MB1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tlr3Q99MB1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tlr3Q99MB1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tlr3Q99MB1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Tlr3Q99MB1 Gm7284-201ENSMUST00000131667 944 ntBASIC17.65■□□□□ 0.42
Tlr3Q99MB1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tlr3Q99MB1 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.65■□□□□ 0.42
Tlr3Q99MB1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tlr3Q99MB1 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tlr3Q99MB1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tlr3Q99MB1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tlr3Q99MB1 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tlr3Q99MB1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tlr3Q99MB1 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tlr3Q99MB1 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tlr3Q99MB1 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tlr3Q99MB1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tlr3Q99MB1 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tlr3Q99MB1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tlr3Q99MB1 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.65■□□□□ 0.42
Tlr3Q99MB1 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tlr3Q99MB1 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Tlr3Q99MB1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tlr3Q99MB1 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tlr3Q99MB1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tlr3Q99MB1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tlr3Q99MB1 Gm11355-201ENSMUST00000121120 306 ntBASIC17.64■□□□□ 0.41
Tlr3Q99MB1 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Tlr3Q99MB1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.64■□□□□ 0.41
Tlr3Q99MB1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tlr3Q99MB1 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tlr3Q99MB1 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tlr3Q99MB1 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Tlr3Q99MB1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tlr3Q99MB1 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.64■□□□□ 0.41
Tlr3Q99MB1 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tlr3Q99MB1 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tlr3Q99MB1 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tlr3Q99MB1 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tlr3Q99MB1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tlr3Q99MB1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tlr3Q99MB1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.63■□□□□ 0.41
Tlr3Q99MB1 Gm37722-201ENSMUST00000193757 208 ntBASIC17.63■□□□□ 0.41
Tlr3Q99MB1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tlr3Q99MB1 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.63■□□□□ 0.41
Tlr3Q99MB1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tlr3Q99MB1 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tlr3Q99MB1 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tlr3Q99MB1 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.63■□□□□ 0.41
Tlr3Q99MB1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tlr3Q99MB1 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Tlr3Q99MB1 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tlr3Q99MB1 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tlr3Q99MB1 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tlr3Q99MB1 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
Tlr3Q99MB1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tlr3Q99MB1 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.62■□□□□ 0.41
Tlr3Q99MB1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Tlr3Q99MB1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tlr3Q99MB1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms