Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
RtcbQ99LF4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
RtcbQ99LF4 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC20.27■□□□□ 0.84
RtcbQ99LF4 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC20.27■□□□□ 0.84
RtcbQ99LF4 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RtcbQ99LF4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.27■□□□□ 0.84
RtcbQ99LF4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RtcbQ99LF4 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RtcbQ99LF4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RtcbQ99LF4 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RtcbQ99LF4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RtcbQ99LF4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.27■□□□□ 0.84
RtcbQ99LF4 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RtcbQ99LF4 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RtcbQ99LF4 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC20.27■□□□□ 0.84
RtcbQ99LF4 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC20.27■□□□□ 0.84
RtcbQ99LF4 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC20.27■□□□□ 0.84
RtcbQ99LF4 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC20.27■□□□□ 0.84
RtcbQ99LF4 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC20.27■□□□□ 0.84
RtcbQ99LF4 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RtcbQ99LF4 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RtcbQ99LF4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RtcbQ99LF4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RtcbQ99LF4 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC20.27■□□□□ 0.83
RtcbQ99LF4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RtcbQ99LF4 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RtcbQ99LF4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.26■□□□□ 0.83
RtcbQ99LF4 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RtcbQ99LF4 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC20.26■□□□□ 0.83
RtcbQ99LF4 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RtcbQ99LF4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RtcbQ99LF4 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RtcbQ99LF4 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RtcbQ99LF4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RtcbQ99LF4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RtcbQ99LF4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RtcbQ99LF4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RtcbQ99LF4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RtcbQ99LF4 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RtcbQ99LF4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RtcbQ99LF4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RtcbQ99LF4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RtcbQ99LF4 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RtcbQ99LF4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.25■□□□□ 0.83
RtcbQ99LF4 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RtcbQ99LF4 Gm4913-201ENSMUST00000117075 1290 ntBASIC20.25■□□□□ 0.83
RtcbQ99LF4 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC20.25■□□□□ 0.83
RtcbQ99LF4 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RtcbQ99LF4 AC174742.1-201ENSMUST00000218272 304 ntBASIC20.25■□□□□ 0.83
RtcbQ99LF4 AC159106.1-201ENSMUST00000224421 690 ntBASIC20.25■□□□□ 0.83
RtcbQ99LF4 Bloc1s5-203ENSMUST00000224902 612 ntBASIC20.25■□□□□ 0.83
RtcbQ99LF4 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RtcbQ99LF4 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RtcbQ99LF4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RtcbQ99LF4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
RtcbQ99LF4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RtcbQ99LF4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.25■□□□□ 0.83
RtcbQ99LF4 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RtcbQ99LF4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RtcbQ99LF4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RtcbQ99LF4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RtcbQ99LF4 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC20.24■□□□□ 0.83
RtcbQ99LF4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RtcbQ99LF4 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RtcbQ99LF4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RtcbQ99LF4 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RtcbQ99LF4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RtcbQ99LF4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RtcbQ99LF4 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC20.24■□□□□ 0.83
RtcbQ99LF4 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RtcbQ99LF4 H2af-ps-201ENSMUST00000119066 295 ntBASIC20.24■□□□□ 0.83
RtcbQ99LF4 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC20.24■□□□□ 0.83
RtcbQ99LF4 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC20.24■□□□□ 0.83
RtcbQ99LF4 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC20.24■□□□□ 0.83
RtcbQ99LF4 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC20.24■□□□□ 0.83
RtcbQ99LF4 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC20.24■□□□□ 0.83
RtcbQ99LF4 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC20.24■□□□□ 0.83
RtcbQ99LF4 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC20.24■□□□□ 0.83
RtcbQ99LF4 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RtcbQ99LF4 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RtcbQ99LF4 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RtcbQ99LF4 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
RtcbQ99LF4 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RtcbQ99LF4 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RtcbQ99LF4 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RtcbQ99LF4 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.24■□□□□ 0.83
RtcbQ99LF4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
RtcbQ99LF4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RtcbQ99LF4 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RtcbQ99LF4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RtcbQ99LF4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RtcbQ99LF4 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
RtcbQ99LF4 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RtcbQ99LF4 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RtcbQ99LF4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RtcbQ99LF4 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RtcbQ99LF4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RtcbQ99LF4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RtcbQ99LF4 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RtcbQ99LF4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms