Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Rfc4Q99J62 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.93■□□□□ 0.62
Rfc4Q99J62 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rfc4Q99J62 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfc4Q99J62 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rfc4Q99J62 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfc4Q99J62 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfc4Q99J62 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Rfc4Q99J62 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfc4Q99J62 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfc4Q99J62 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfc4Q99J62 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.93■□□□□ 0.62
Rfc4Q99J62 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rfc4Q99J62 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfc4Q99J62 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfc4Q99J62 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfc4Q99J62 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.92■□□□□ 0.62
Rfc4Q99J62 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.92■□□□□ 0.62
Rfc4Q99J62 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.92■□□□□ 0.62
Rfc4Q99J62 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.92■□□□□ 0.62
Rfc4Q99J62 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.92■□□□□ 0.62
Rfc4Q99J62 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.92■□□□□ 0.62
Rfc4Q99J62 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfc4Q99J62 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfc4Q99J62 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.92■□□□□ 0.62
Rfc4Q99J62 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rfc4Q99J62 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.92■□□□□ 0.62
Rfc4Q99J62 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfc4Q99J62 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfc4Q99J62 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfc4Q99J62 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Rfc4Q99J62 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfc4Q99J62 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rfc4Q99J62 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rfc4Q99J62 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfc4Q99J62 Gm11779-201ENSMUST00000118541 368 ntBASIC18.91■□□□□ 0.62
Rfc4Q99J62 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rfc4Q99J62 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.91■□□□□ 0.62
Rfc4Q99J62 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
Rfc4Q99J62 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfc4Q99J62 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfc4Q99J62 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfc4Q99J62 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfc4Q99J62 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.91■□□□□ 0.62
Rfc4Q99J62 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rfc4Q99J62 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfc4Q99J62 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfc4Q99J62 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rfc4Q99J62 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.91■□□□□ 0.62
Rfc4Q99J62 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfc4Q99J62 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfc4Q99J62 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfc4Q99J62 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfc4Q99J62 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfc4Q99J62 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.9■□□□□ 0.62
Rfc4Q99J62 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfc4Q99J62 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rfc4Q99J62 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.9■□□□□ 0.62
Rfc4Q99J62 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfc4Q99J62 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfc4Q99J62 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfc4Q99J62 Gm25990-201ENSMUST00000102440 86 ntBASIC18.9■□□□□ 0.62
Rfc4Q99J62 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Rfc4Q99J62 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
Rfc4Q99J62 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfc4Q99J62 Gm4535-201ENSMUST00000182274 558 ntBASIC18.9■□□□□ 0.62
Rfc4Q99J62 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
Rfc4Q99J62 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfc4Q99J62 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfc4Q99J62 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfc4Q99J62 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfc4Q99J62 Gm10355-201ENSMUST00000097146 517 ntBASIC18.9■□□□□ 0.62
Rfc4Q99J62 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Rfc4Q99J62 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.9■□□□□ 0.62
Rfc4Q99J62 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rfc4Q99J62 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfc4Q99J62 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Rfc4Q99J62 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfc4Q99J62 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfc4Q99J62 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rfc4Q99J62 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Rfc4Q99J62 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
Rfc4Q99J62 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfc4Q99J62 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfc4Q99J62 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.89■□□□□ 0.61
Rfc4Q99J62 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfc4Q99J62 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rfc4Q99J62 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rfc4Q99J62 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rfc4Q99J62 Gm13418-201ENSMUST00000119097 944 ntBASIC18.89■□□□□ 0.61
Rfc4Q99J62 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfc4Q99J62 Gm7230-201ENSMUST00000173026 815 ntBASIC18.89■□□□□ 0.61
Rfc4Q99J62 Gm7506-201ENSMUST00000207758 815 ntBASIC18.89■□□□□ 0.61
Rfc4Q99J62 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfc4Q99J62 Psmb5-202ENSMUST00000227257 622 ntBASIC18.89■□□□□ 0.61
Rfc4Q99J62 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Rfc4Q99J62 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Rfc4Q99J62 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfc4Q99J62 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rfc4Q99J62 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms