Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b3Q921M3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.74■□□□□ 0.75
Sf3b3Q921M3 AC159093.1-201ENSMUST00000227779 380 ntBASIC19.74■□□□□ 0.75
Sf3b3Q921M3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b3Q921M3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Sf3b3Q921M3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.74■□□□□ 0.75
Sf3b3Q921M3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b3Q921M3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b3Q921M3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b3Q921M3 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b3Q921M3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.74■□□□□ 0.75
Sf3b3Q921M3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b3Q921M3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Sf3b3Q921M3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Sf3b3Q921M3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b3Q921M3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b3Q921M3 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b3Q921M3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b3Q921M3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b3Q921M3 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.73■□□□□ 0.75
Sf3b3Q921M3 Gm13036-201ENSMUST00000117799 748 ntBASIC19.73■□□□□ 0.75
Sf3b3Q921M3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b3Q921M3 Gm27628-201ENSMUST00000184911 107 ntBASIC19.73■□□□□ 0.75
Sf3b3Q921M3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b3Q921M3 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b3Q921M3 Gm42670-201ENSMUST00000201816 1292 ntBASIC19.73■□□□□ 0.75
Sf3b3Q921M3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC19.73■□□□□ 0.75
Sf3b3Q921M3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b3Q921M3 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b3Q921M3 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Sf3b3Q921M3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b3Q921M3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b3Q921M3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b3Q921M3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b3Q921M3 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.73■□□□□ 0.75
Sf3b3Q921M3 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Sf3b3Q921M3 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.73■□□□□ 0.75
Sf3b3Q921M3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b3Q921M3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b3Q921M3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Sf3b3Q921M3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b3Q921M3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b3Q921M3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Sf3b3Q921M3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
Sf3b3Q921M3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Sf3b3Q921M3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Sf3b3Q921M3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b3Q921M3 Gm15467-201ENSMUST00000120582 445 ntBASIC19.72■□□□□ 0.75
Sf3b3Q921M3 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Sf3b3Q921M3 Gm11594-201ENSMUST00000122313 162 ntBASIC19.72■□□□□ 0.75
Sf3b3Q921M3 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC19.72■□□□□ 0.75
Sf3b3Q921M3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b3Q921M3 Gm37500-201ENSMUST00000192059 1443 ntBASIC19.72■□□□□ 0.75
Sf3b3Q921M3 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.72■□□□□ 0.75
Sf3b3Q921M3 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b3Q921M3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b3Q921M3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b3Q921M3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b3Q921M3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b3Q921M3 Gm3928-201ENSMUST00000121141 1307 ntBASIC19.72■□□□□ 0.75
Sf3b3Q921M3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b3Q921M3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b3Q921M3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC19.71■□□□□ 0.75
Sf3b3Q921M3 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3b3Q921M3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3b3Q921M3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3b3Q921M3 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC19.71■□□□□ 0.75
Sf3b3Q921M3 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC19.71■□□□□ 0.75
Sf3b3Q921M3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3b3Q921M3 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC19.71■□□□□ 0.75
Sf3b3Q921M3 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC19.71■□□□□ 0.75
Sf3b3Q921M3 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3b3Q921M3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC19.71■□□□□ 0.75
Sf3b3Q921M3 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Sf3b3Q921M3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3b3Q921M3 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Sf3b3Q921M3 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Sf3b3Q921M3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3b3Q921M3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3b3Q921M3 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3b3Q921M3 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3b3Q921M3 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.71■□□□□ 0.75
Sf3b3Q921M3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3b3Q921M3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3b3Q921M3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
Sf3b3Q921M3 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3b3Q921M3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3b3Q921M3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC19.7■□□□□ 0.74
Sf3b3Q921M3 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3b3Q921M3 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3b3Q921M3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3b3Q921M3 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3b3Q921M3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3b3Q921M3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3b3Q921M3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3b3Q921M3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
Sf3b3Q921M3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3b3Q921M3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.69■□□□□ 0.74
Sf3b3Q921M3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3b3Q921M3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms