Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha11Q91Y19 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Pcdha11Q91Y19 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha11Q91Y19 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha11Q91Y19 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha11Q91Y19 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha11Q91Y19 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Pcdha11Q91Y19 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha11Q91Y19 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha11Q91Y19 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha11Q91Y19 Olfr129-201ENSMUST00000122318 993 ntBASIC17.29■□□□□ 0.36
Pcdha11Q91Y19 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha11Q91Y19 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Pcdha11Q91Y19 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha11Q91Y19 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha11Q91Y19 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha11Q91Y19 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha11Q91Y19 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha11Q91Y19 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha11Q91Y19 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha11Q91Y19 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdha11Q91Y19 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha11Q91Y19 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha11Q91Y19 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha11Q91Y19 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pcdha11Q91Y19 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha11Q91Y19 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha11Q91Y19 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha11Q91Y19 Gm10052-201ENSMUST00000168019 960 ntBASIC17.28■□□□□ 0.36
Pcdha11Q91Y19 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha11Q91Y19 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha11Q91Y19 Gm7729-201ENSMUST00000050143 801 ntBASIC17.28■□□□□ 0.36
Pcdha11Q91Y19 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha11Q91Y19 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdha11Q91Y19 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha11Q91Y19 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha11Q91Y19 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pcdha11Q91Y19 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha11Q91Y19 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha11Q91Y19 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha11Q91Y19 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha11Q91Y19 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.27■□□□□ 0.36
Pcdha11Q91Y19 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdha11Q91Y19 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.27■□□□□ 0.36
Pcdha11Q91Y19 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdha11Q91Y19 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdha11Q91Y19 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Pcdha11Q91Y19 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdha11Q91Y19 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdha11Q91Y19 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.27■□□□□ 0.36
Pcdha11Q91Y19 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdha11Q91Y19 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdha11Q91Y19 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Pcdha11Q91Y19 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.27■□□□□ 0.36
Pcdha11Q91Y19 Gm27357-201ENSMUST00000183754 135 ntBASIC17.27■□□□□ 0.36
Pcdha11Q91Y19 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.27■□□□□ 0.36
Pcdha11Q91Y19 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.27■□□□□ 0.36
Pcdha11Q91Y19 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pcdha11Q91Y19 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.27■□□□□ 0.36
Pcdha11Q91Y19 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdha11Q91Y19 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdha11Q91Y19 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdha11Q91Y19 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdha11Q91Y19 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Pcdha11Q91Y19 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdha11Q91Y19 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.27■□□□□ 0.35
Pcdha11Q91Y19 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.26■□□□□ 0.35
Pcdha11Q91Y19 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdha11Q91Y19 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdha11Q91Y19 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdha11Q91Y19 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdha11Q91Y19 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.26■□□□□ 0.35
Pcdha11Q91Y19 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.26■□□□□ 0.35
Pcdha11Q91Y19 Gm18669-201ENSMUST00000216049 778 ntBASIC17.26■□□□□ 0.35
Pcdha11Q91Y19 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdha11Q91Y19 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdha11Q91Y19 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdha11Q91Y19 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdha11Q91Y19 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdha11Q91Y19 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdha11Q91Y19 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdha11Q91Y19 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdha11Q91Y19 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdha11Q91Y19 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Pcdha11Q91Y19 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.26■□□□□ 0.35
Pcdha11Q91Y19 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha11Q91Y19 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha11Q91Y19 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha11Q91Y19 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha11Q91Y19 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha11Q91Y19 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Pcdha11Q91Y19 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha11Q91Y19 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Pcdha11Q91Y19 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Pcdha11Q91Y19 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha11Q91Y19 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha11Q91Y19 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.25■□□□□ 0.35
Pcdha11Q91Y19 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha11Q91Y19 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha11Q91Y19 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms