Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb18Q91Y02 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb18Q91Y02 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb18Q91Y02 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb18Q91Y02 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb18Q91Y02 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb18Q91Y02 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Pcdhb18Q91Y02 Gm13312-201ENSMUST00000119631 718 ntBASIC17.18■□□□□ 0.34
Pcdhb18Q91Y02 Gm18733-201ENSMUST00000173950 856 ntBASIC17.18■□□□□ 0.34
Pcdhb18Q91Y02 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdhb18Q91Y02 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb18Q91Y02 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb18Q91Y02 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb18Q91Y02 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb18Q91Y02 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdhb18Q91Y02 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb18Q91Y02 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdhb18Q91Y02 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb18Q91Y02 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb18Q91Y02 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb18Q91Y02 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb18Q91Y02 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.17■□□□□ 0.34
Pcdhb18Q91Y02 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb18Q91Y02 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb18Q91Y02 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb18Q91Y02 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb18Q91Y02 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb18Q91Y02 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb18Q91Y02 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb18Q91Y02 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb18Q91Y02 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb18Q91Y02 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.17■□□□□ 0.34
Pcdhb18Q91Y02 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb18Q91Y02 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb18Q91Y02 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb18Q91Y02 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb18Q91Y02 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb18Q91Y02 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb18Q91Y02 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb18Q91Y02 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb18Q91Y02 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb18Q91Y02 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb18Q91Y02 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb18Q91Y02 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb18Q91Y02 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb18Q91Y02 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.16■□□□□ 0.34
Pcdhb18Q91Y02 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb18Q91Y02 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb18Q91Y02 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.16■□□□□ 0.34
Pcdhb18Q91Y02 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb18Q91Y02 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb18Q91Y02 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb18Q91Y02 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb18Q91Y02 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb18Q91Y02 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb18Q91Y02 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb18Q91Y02 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb18Q91Y02 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb18Q91Y02 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb18Q91Y02 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb18Q91Y02 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb18Q91Y02 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdhb18Q91Y02 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb18Q91Y02 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhb18Q91Y02 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.15■□□□□ 0.34
Pcdhb18Q91Y02 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdhb18Q91Y02 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb18Q91Y02 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb18Q91Y02 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhb18Q91Y02 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb18Q91Y02 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.15■□□□□ 0.34
Pcdhb18Q91Y02 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdhb18Q91Y02 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb18Q91Y02 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdhb18Q91Y02 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pcdhb18Q91Y02 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb18Q91Y02 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb18Q91Y02 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.15■□□□□ 0.34
Pcdhb18Q91Y02 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhb18Q91Y02 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb18Q91Y02 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb18Q91Y02 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb18Q91Y02 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb18Q91Y02 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb18Q91Y02 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb18Q91Y02 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdhb18Q91Y02 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdhb18Q91Y02 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb18Q91Y02 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb18Q91Y02 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhb18Q91Y02 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcdhb18Q91Y02 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb18Q91Y02 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb18Q91Y02 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb18Q91Y02 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.14■□□□□ 0.33
Pcdhb18Q91Y02 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb18Q91Y02 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb18Q91Y02 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhb18Q91Y02 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb18Q91Y02 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms