Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trex1Q91XB0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trex1Q91XB0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trex1Q91XB0 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trex1Q91XB0 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.82■□□□□ 0.6
Trex1Q91XB0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trex1Q91XB0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trex1Q91XB0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trex1Q91XB0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trex1Q91XB0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trex1Q91XB0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trex1Q91XB0 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.82■□□□□ 0.6
Trex1Q91XB0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trex1Q91XB0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trex1Q91XB0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trex1Q91XB0 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trex1Q91XB0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trex1Q91XB0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trex1Q91XB0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trex1Q91XB0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trex1Q91XB0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trex1Q91XB0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Trex1Q91XB0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trex1Q91XB0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trex1Q91XB0 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.81■□□□□ 0.6
Trex1Q91XB0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trex1Q91XB0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trex1Q91XB0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trex1Q91XB0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trex1Q91XB0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trex1Q91XB0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trex1Q91XB0 Gm13418-201ENSMUST00000119097 944 ntBASIC18.8■□□□□ 0.6
Trex1Q91XB0 Gm12350-201ENSMUST00000121208 462 ntBASIC18.8■□□□□ 0.6
Trex1Q91XB0 Gm1401-201ENSMUST00000122048 772 ntBASIC18.8■□□□□ 0.6
Trex1Q91XB0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.8■□□□□ 0.6
Trex1Q91XB0 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.8■□□□□ 0.6
Trex1Q91XB0 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trex1Q91XB0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.8■□□□□ 0.6
Trex1Q91XB0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.8■□□□□ 0.6
Trex1Q91XB0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trex1Q91XB0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trex1Q91XB0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trex1Q91XB0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.8■□□□□ 0.6
Trex1Q91XB0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trex1Q91XB0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.8■□□□□ 0.6
Trex1Q91XB0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trex1Q91XB0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trex1Q91XB0 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.79■□□□□ 0.6
Trex1Q91XB0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trex1Q91XB0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trex1Q91XB0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trex1Q91XB0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Trex1Q91XB0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.79■□□□□ 0.6
Trex1Q91XB0 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.79■□□□□ 0.6
Trex1Q91XB0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.79■□□□□ 0.6
Trex1Q91XB0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.79■□□□□ 0.6
Trex1Q91XB0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.79■□□□□ 0.6
Trex1Q91XB0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trex1Q91XB0 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trex1Q91XB0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trex1Q91XB0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trex1Q91XB0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trex1Q91XB0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trex1Q91XB0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trex1Q91XB0 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trex1Q91XB0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trex1Q91XB0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trex1Q91XB0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trex1Q91XB0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trex1Q91XB0 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trex1Q91XB0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trex1Q91XB0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trex1Q91XB0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trex1Q91XB0 Gm25990-201ENSMUST00000102440 86 ntBASIC18.78■□□□□ 0.6
Trex1Q91XB0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trex1Q91XB0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.78■□□□□ 0.6
Trex1Q91XB0 Gm4535-201ENSMUST00000182274 558 ntBASIC18.78■□□□□ 0.6
Trex1Q91XB0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.78■□□□□ 0.6
Trex1Q91XB0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trex1Q91XB0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trex1Q91XB0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trex1Q91XB0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trex1Q91XB0 Gm10355-201ENSMUST00000097146 517 ntBASIC18.78■□□□□ 0.6
Trex1Q91XB0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trex1Q91XB0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trex1Q91XB0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trex1Q91XB0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Trex1Q91XB0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trex1Q91XB0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trex1Q91XB0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trex1Q91XB0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.77■□□□□ 0.6
Trex1Q91XB0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Trex1Q91XB0 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trex1Q91XB0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trex1Q91XB0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.77■□□□□ 0.6
Trex1Q91XB0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trex1Q91XB0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.77■□□□□ 0.6
Trex1Q91XB0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trex1Q91XB0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.77■□□□□ 0.6
Trex1Q91XB0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms