Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.12□□□□□ -0.15
Cspg4Q8VHY0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg4Q8VHY0 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg4Q8VHY0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg4Q8VHY0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cspg4Q8VHY0 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg4Q8VHY0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg4Q8VHY0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cspg4Q8VHY0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg4Q8VHY0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg4Q8VHY0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg4Q8VHY0 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.12□□□□□ -0.15
Cspg4Q8VHY0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg4Q8VHY0 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.12□□□□□ -0.15
Cspg4Q8VHY0 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.12□□□□□ -0.15
Cspg4Q8VHY0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg4Q8VHY0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg4Q8VHY0 Iqck-206ENSMUST00000208658 2891 ntBASIC14.12□□□□□ -0.15
Cspg4Q8VHY0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cspg4Q8VHY0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cspg4Q8VHY0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cspg4Q8VHY0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cspg4Q8VHY0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cspg4Q8VHY0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.11□□□□□ -0.15
Cspg4Q8VHY0 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cspg4Q8VHY0 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.11□□□□□ -0.15
Cspg4Q8VHY0 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.11□□□□□ -0.15
Cspg4Q8VHY0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cspg4Q8VHY0 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cspg4Q8VHY0 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cspg4Q8VHY0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.11□□□□□ -0.15
Cspg4Q8VHY0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cspg4Q8VHY0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cspg4Q8VHY0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cspg4Q8VHY0 Gm14127-201ENSMUST00000117906 678 ntBASIC14.1□□□□□ -0.15
Cspg4Q8VHY0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cspg4Q8VHY0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cspg4Q8VHY0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cspg4Q8VHY0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cspg4Q8VHY0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cspg4Q8VHY0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.1□□□□□ -0.15
Cspg4Q8VHY0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cspg4Q8VHY0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cspg4Q8VHY0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cspg4Q8VHY0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cspg4Q8VHY0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cspg4Q8VHY0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cspg4Q8VHY0 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cspg4Q8VHY0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cspg4Q8VHY0 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cspg4Q8VHY0 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Cspg4Q8VHY0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cspg4Q8VHY0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.1□□□□□ -0.15
Cspg4Q8VHY0 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.1□□□□□ -0.15
Cspg4Q8VHY0 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cspg4Q8VHY0 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cspg4Q8VHY0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cspg4Q8VHY0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Cspg4Q8VHY0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Cspg4Q8VHY0 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.09□□□□□ -0.15
Cspg4Q8VHY0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cspg4Q8VHY0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cspg4Q8VHY0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cspg4Q8VHY0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cspg4Q8VHY0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.09□□□□□ -0.15
Cspg4Q8VHY0 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.09□□□□□ -0.15
Cspg4Q8VHY0 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cspg4Q8VHY0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cspg4Q8VHY0 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cspg4Q8VHY0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cspg4Q8VHY0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cspg4Q8VHY0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cspg4Q8VHY0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cspg4Q8VHY0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cspg4Q8VHY0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cspg4Q8VHY0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cspg4Q8VHY0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cspg4Q8VHY0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.09□□□□□ -0.15
Cspg4Q8VHY0 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.09□□□□□ -0.15
Cspg4Q8VHY0 Mir8117-201ENSMUST00000184773 107 ntBASIC14.09□□□□□ -0.15
Cspg4Q8VHY0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cspg4Q8VHY0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cspg4Q8VHY0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cspg4Q8VHY0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Cspg4Q8VHY0 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cspg4Q8VHY0 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.08□□□□□ -0.16
Cspg4Q8VHY0 Gm11780-201ENSMUST00000136880 516 ntBASIC14.08□□□□□ -0.16
Cspg4Q8VHY0 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cspg4Q8VHY0 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cspg4Q8VHY0 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Cspg4Q8VHY0 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cspg4Q8VHY0 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cspg4Q8VHY0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cspg4Q8VHY0 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.08□□□□□ -0.16
Cspg4Q8VHY0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cspg4Q8VHY0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cspg4Q8VHY0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.08□□□□□ -0.16
Cspg4Q8VHY0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cspg4Q8VHY0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cspg4Q8VHY0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms