Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rpap2Q8VC34 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rpap2Q8VC34 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Rpap2Q8VC34 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rpap2Q8VC34 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rpap2Q8VC34 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rpap2Q8VC34 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rpap2Q8VC34 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.06■□□□□ 0.48
Rpap2Q8VC34 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rpap2Q8VC34 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rpap2Q8VC34 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.06■□□□□ 0.48
Rpap2Q8VC34 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rpap2Q8VC34 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Rpap2Q8VC34 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.06■□□□□ 0.48
Rpap2Q8VC34 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rpap2Q8VC34 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rpap2Q8VC34 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rpap2Q8VC34 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rpap2Q8VC34 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rpap2Q8VC34 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rpap2Q8VC34 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Rpap2Q8VC34 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rpap2Q8VC34 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rpap2Q8VC34 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rpap2Q8VC34 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rpap2Q8VC34 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rpap2Q8VC34 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.05■□□□□ 0.48
Rpap2Q8VC34 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Rpap2Q8VC34 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rpap2Q8VC34 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rpap2Q8VC34 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rpap2Q8VC34 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rpap2Q8VC34 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rpap2Q8VC34 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpap2Q8VC34 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpap2Q8VC34 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpap2Q8VC34 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpap2Q8VC34 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpap2Q8VC34 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpap2Q8VC34 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpap2Q8VC34 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.04■□□□□ 0.48
Rpap2Q8VC34 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.04■□□□□ 0.48
Rpap2Q8VC34 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpap2Q8VC34 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpap2Q8VC34 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpap2Q8VC34 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpap2Q8VC34 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rpap2Q8VC34 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rpap2Q8VC34 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rpap2Q8VC34 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.04■□□□□ 0.48
Rpap2Q8VC34 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rpap2Q8VC34 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Rpap2Q8VC34 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.03■□□□□ 0.48
Rpap2Q8VC34 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Rpap2Q8VC34 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rpap2Q8VC34 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Rpap2Q8VC34 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rpap2Q8VC34 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rpap2Q8VC34 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Rpap2Q8VC34 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.03■□□□□ 0.48
Rpap2Q8VC34 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rpap2Q8VC34 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rpap2Q8VC34 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rpap2Q8VC34 AA414768-201ENSMUST00000121924 1257 ntBASIC18.03■□□□□ 0.48
Rpap2Q8VC34 Gm6623-201ENSMUST00000173570 544 ntBASIC18.03■□□□□ 0.48
Rpap2Q8VC34 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.03■□□□□ 0.48
Rpap2Q8VC34 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rpap2Q8VC34 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.03■□□□□ 0.48
Rpap2Q8VC34 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rpap2Q8VC34 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rpap2Q8VC34 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rpap2Q8VC34 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Rpap2Q8VC34 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rpap2Q8VC34 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rpap2Q8VC34 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.03■□□□□ 0.48
Rpap2Q8VC34 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rpap2Q8VC34 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rpap2Q8VC34 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rpap2Q8VC34 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rpap2Q8VC34 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Rpap2Q8VC34 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.03■□□□□ 0.48
Rpap2Q8VC34 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.02■□□□□ 0.48
Rpap2Q8VC34 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rpap2Q8VC34 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rpap2Q8VC34 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rpap2Q8VC34 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rpap2Q8VC34 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rpap2Q8VC34 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rpap2Q8VC34 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rpap2Q8VC34 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Rpap2Q8VC34 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rpap2Q8VC34 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Rpap2Q8VC34 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rpap2Q8VC34 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rpap2Q8VC34 Gm6345-202ENSMUST00000180900 204 ntBASIC18.02■□□□□ 0.48
Rpap2Q8VC34 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rpap2Q8VC34 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.02■□□□□ 0.48
Rpap2Q8VC34 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rpap2Q8VC34 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.02■□□□□ 0.48
Rpap2Q8VC34 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms