Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atf7Q8R0S1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atf7Q8R0S1 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atf7Q8R0S1 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atf7Q8R0S1 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Atf7Q8R0S1 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Atf7Q8R0S1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atf7Q8R0S1 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atf7Q8R0S1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.44■□□□□ 0.7
Atf7Q8R0S1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Atf7Q8R0S1 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.44■□□□□ 0.7
Atf7Q8R0S1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.44■□□□□ 0.7
Atf7Q8R0S1 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Atf7Q8R0S1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atf7Q8R0S1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atf7Q8R0S1 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atf7Q8R0S1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atf7Q8R0S1 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Atf7Q8R0S1 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Atf7Q8R0S1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atf7Q8R0S1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atf7Q8R0S1 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atf7Q8R0S1 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.43■□□□□ 0.7
Atf7Q8R0S1 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atf7Q8R0S1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Atf7Q8R0S1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.43■□□□□ 0.7
Atf7Q8R0S1 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.43■□□□□ 0.7
Atf7Q8R0S1 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Atf7Q8R0S1 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Atf7Q8R0S1 Gm37722-201ENSMUST00000193757 208 ntBASIC19.43■□□□□ 0.7
Atf7Q8R0S1 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atf7Q8R0S1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Atf7Q8R0S1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atf7Q8R0S1 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Atf7Q8R0S1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atf7Q8R0S1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atf7Q8R0S1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Atf7Q8R0S1 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atf7Q8R0S1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atf7Q8R0S1 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atf7Q8R0S1 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atf7Q8R0S1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atf7Q8R0S1 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atf7Q8R0S1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atf7Q8R0S1 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.42■□□□□ 0.7
Atf7Q8R0S1 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atf7Q8R0S1 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atf7Q8R0S1 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atf7Q8R0S1 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atf7Q8R0S1 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atf7Q8R0S1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atf7Q8R0S1 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atf7Q8R0S1 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atf7Q8R0S1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atf7Q8R0S1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Atf7Q8R0S1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atf7Q8R0S1 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atf7Q8R0S1 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atf7Q8R0S1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.41■□□□□ 0.7
Atf7Q8R0S1 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atf7Q8R0S1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atf7Q8R0S1 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Atf7Q8R0S1 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Atf7Q8R0S1 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Atf7Q8R0S1 Gm11355-201ENSMUST00000121120 306 ntBASIC19.41■□□□□ 0.7
Atf7Q8R0S1 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.41■□□□□ 0.7
Atf7Q8R0S1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atf7Q8R0S1 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Atf7Q8R0S1 Gm10231-201ENSMUST00000181584 441 ntBASIC19.41■□□□□ 0.7
Atf7Q8R0S1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atf7Q8R0S1 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Atf7Q8R0S1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atf7Q8R0S1 Gm10175-202ENSMUST00000208752 441 ntBASIC19.41■□□□□ 0.7
Atf7Q8R0S1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atf7Q8R0S1 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atf7Q8R0S1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atf7Q8R0S1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atf7Q8R0S1 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atf7Q8R0S1 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atf7Q8R0S1 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Atf7Q8R0S1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Atf7Q8R0S1 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atf7Q8R0S1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atf7Q8R0S1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Atf7Q8R0S1 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atf7Q8R0S1 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Atf7Q8R0S1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atf7Q8R0S1 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Atf7Q8R0S1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Atf7Q8R0S1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.4■□□□□ 0.7
Atf7Q8R0S1 Gm36967-201ENSMUST00000193814 266 ntBASIC19.4■□□□□ 0.7
Atf7Q8R0S1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Atf7Q8R0S1 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atf7Q8R0S1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.4■□□□□ 0.7
Atf7Q8R0S1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atf7Q8R0S1 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Atf7Q8R0S1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atf7Q8R0S1 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atf7Q8R0S1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Atf7Q8R0S1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms