Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cchcr1Q8K2I2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cchcr1Q8K2I2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cchcr1Q8K2I2 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cchcr1Q8K2I2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cchcr1Q8K2I2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Cchcr1Q8K2I2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cchcr1Q8K2I2 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cchcr1Q8K2I2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cchcr1Q8K2I2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cchcr1Q8K2I2 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Cchcr1Q8K2I2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cchcr1Q8K2I2 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cchcr1Q8K2I2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Cchcr1Q8K2I2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cchcr1Q8K2I2 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cchcr1Q8K2I2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC19.46■□□□□ 0.71
Cchcr1Q8K2I2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.46■□□□□ 0.71
Cchcr1Q8K2I2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cchcr1Q8K2I2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cchcr1Q8K2I2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.46■□□□□ 0.71
Cchcr1Q8K2I2 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.46■□□□□ 0.71
Cchcr1Q8K2I2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
Cchcr1Q8K2I2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cchcr1Q8K2I2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cchcr1Q8K2I2 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cchcr1Q8K2I2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cchcr1Q8K2I2 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.46■□□□□ 0.71
Cchcr1Q8K2I2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.46■□□□□ 0.71
Cchcr1Q8K2I2 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cchcr1Q8K2I2 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Cchcr1Q8K2I2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cchcr1Q8K2I2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cchcr1Q8K2I2 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cchcr1Q8K2I2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cchcr1Q8K2I2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.45■□□□□ 0.7
Cchcr1Q8K2I2 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cchcr1Q8K2I2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cchcr1Q8K2I2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Cchcr1Q8K2I2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cchcr1Q8K2I2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cchcr1Q8K2I2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cchcr1Q8K2I2 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cchcr1Q8K2I2 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cchcr1Q8K2I2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cchcr1Q8K2I2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cchcr1Q8K2I2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cchcr1Q8K2I2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cchcr1Q8K2I2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cchcr1Q8K2I2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cchcr1Q8K2I2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Cchcr1Q8K2I2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cchcr1Q8K2I2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cchcr1Q8K2I2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Cchcr1Q8K2I2 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Cchcr1Q8K2I2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.44■□□□□ 0.7
Cchcr1Q8K2I2 Gm44450-201ENSMUST00000199528 114 ntBASIC19.44■□□□□ 0.7
Cchcr1Q8K2I2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Cchcr1Q8K2I2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Cchcr1Q8K2I2 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cchcr1Q8K2I2 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cchcr1Q8K2I2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Cchcr1Q8K2I2 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cchcr1Q8K2I2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cchcr1Q8K2I2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cchcr1Q8K2I2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Cchcr1Q8K2I2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.44■□□□□ 0.7
Cchcr1Q8K2I2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cchcr1Q8K2I2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cchcr1Q8K2I2 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cchcr1Q8K2I2 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.43■□□□□ 0.7
Cchcr1Q8K2I2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cchcr1Q8K2I2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cchcr1Q8K2I2 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.43■□□□□ 0.7
Cchcr1Q8K2I2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cchcr1Q8K2I2 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cchcr1Q8K2I2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cchcr1Q8K2I2 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cchcr1Q8K2I2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cchcr1Q8K2I2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cchcr1Q8K2I2 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cchcr1Q8K2I2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.43■□□□□ 0.7
Cchcr1Q8K2I2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cchcr1Q8K2I2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cchcr1Q8K2I2 Gm37055-201ENSMUST00000191866 133 ntBASIC19.43■□□□□ 0.7
Cchcr1Q8K2I2 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cchcr1Q8K2I2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cchcr1Q8K2I2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cchcr1Q8K2I2 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cchcr1Q8K2I2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cchcr1Q8K2I2 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Cchcr1Q8K2I2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cchcr1Q8K2I2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cchcr1Q8K2I2 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Cchcr1Q8K2I2 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cchcr1Q8K2I2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.43■□□□□ 0.7
Cchcr1Q8K2I2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cchcr1Q8K2I2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cchcr1Q8K2I2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Cchcr1Q8K2I2 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms