Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim5Q8CI51 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Pdlim5Q8CI51 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.15■□□□□ 0.02
Pdlim5Q8CI51 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim5Q8CI51 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
Pdlim5Q8CI51 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim5Q8CI51 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim5Q8CI51 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim5Q8CI51 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim5Q8CI51 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim5Q8CI51 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim5Q8CI51 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim5Q8CI51 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim5Q8CI51 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim5Q8CI51 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim5Q8CI51 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim5Q8CI51 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim5Q8CI51 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Pdlim5Q8CI51 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim5Q8CI51 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim5Q8CI51 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim5Q8CI51 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim5Q8CI51 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.14■□□□□ 0.01
Pdlim5Q8CI51 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Pdlim5Q8CI51 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Pdlim5Q8CI51 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.14■□□□□ 0.01
Pdlim5Q8CI51 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Pdlim5Q8CI51 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim5Q8CI51 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim5Q8CI51 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim5Q8CI51 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim5Q8CI51 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim5Q8CI51 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pdlim5Q8CI51 Actl10-202ENSMUST00000226583 1501 ntBASIC15.13■□□□□ 0.01
Pdlim5Q8CI51 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pdlim5Q8CI51 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Pdlim5Q8CI51 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim5Q8CI51 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pdlim5Q8CI51 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Pdlim5Q8CI51 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.13■□□□□ 0.01
Pdlim5Q8CI51 Gm30025-201ENSMUST00000218555 728 ntBASIC15.13■□□□□ 0.01
Pdlim5Q8CI51 Gm7370-201ENSMUST00000219471 767 ntBASIC15.13■□□□□ 0.01
Pdlim5Q8CI51 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim5Q8CI51 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim5Q8CI51 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim5Q8CI51 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim5Q8CI51 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim5Q8CI51 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim5Q8CI51 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pdlim5Q8CI51 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim5Q8CI51 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim5Q8CI51 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim5Q8CI51 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 Gm13474-201ENSMUST00000122466 815 ntBASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 Gm2274-201ENSMUST00000184539 609 ntBASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 Gm18115-201ENSMUST00000221209 621 ntBASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim5Q8CI51 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim5Q8CI51 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms