Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rbm28Q8CGC6 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rbm28Q8CGC6 Gm24589-201ENSMUST00000116692 94 ntBASIC19.43■□□□□ 0.7
Rbm28Q8CGC6 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.43■□□□□ 0.7
Rbm28Q8CGC6 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.43■□□□□ 0.7
Rbm28Q8CGC6 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rbm28Q8CGC6 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rbm28Q8CGC6 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rbm28Q8CGC6 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.43■□□□□ 0.7
Rbm28Q8CGC6 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rbm28Q8CGC6 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rbm28Q8CGC6 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rbm28Q8CGC6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.42■□□□□ 0.7
Rbm28Q8CGC6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rbm28Q8CGC6 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rbm28Q8CGC6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rbm28Q8CGC6 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.42■□□□□ 0.7
Rbm28Q8CGC6 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.42■□□□□ 0.7
Rbm28Q8CGC6 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rbm28Q8CGC6 Gm18421-201ENSMUST00000204122 625 ntBASIC19.42■□□□□ 0.7
Rbm28Q8CGC6 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rbm28Q8CGC6 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rbm28Q8CGC6 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.42■□□□□ 0.7
Rbm28Q8CGC6 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Rbm28Q8CGC6 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Rbm28Q8CGC6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rbm28Q8CGC6 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rbm28Q8CGC6 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.42■□□□□ 0.7
Rbm28Q8CGC6 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rbm28Q8CGC6 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rbm28Q8CGC6 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rbm28Q8CGC6 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rbm28Q8CGC6 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rbm28Q8CGC6 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rbm28Q8CGC6 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rbm28Q8CGC6 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rbm28Q8CGC6 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Rbm28Q8CGC6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.41■□□□□ 0.7
Rbm28Q8CGC6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.41■□□□□ 0.7
Rbm28Q8CGC6 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.41■□□□□ 0.7
Rbm28Q8CGC6 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Rbm28Q8CGC6 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rbm28Q8CGC6 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.41■□□□□ 0.7
Rbm28Q8CGC6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rbm28Q8CGC6 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rbm28Q8CGC6 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.41■□□□□ 0.7
Rbm28Q8CGC6 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rbm28Q8CGC6 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rbm28Q8CGC6 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rbm28Q8CGC6 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rbm28Q8CGC6 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rbm28Q8CGC6 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rbm28Q8CGC6 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rbm28Q8CGC6 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rbm28Q8CGC6 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rbm28Q8CGC6 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Rbm28Q8CGC6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.4■□□□□ 0.7
Rbm28Q8CGC6 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rbm28Q8CGC6 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rbm28Q8CGC6 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rbm28Q8CGC6 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Rbm28Q8CGC6 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rbm28Q8CGC6 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rbm28Q8CGC6 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Rbm28Q8CGC6 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Rbm28Q8CGC6 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.4■□□□□ 0.7
Rbm28Q8CGC6 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rbm28Q8CGC6 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Rbm28Q8CGC6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.4■□□□□ 0.7
Rbm28Q8CGC6 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rbm28Q8CGC6 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Rbm28Q8CGC6 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rbm28Q8CGC6 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rbm28Q8CGC6 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rbm28Q8CGC6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rbm28Q8CGC6 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rbm28Q8CGC6 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rbm28Q8CGC6 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.39■□□□□ 0.69
Rbm28Q8CGC6 Gm34391-201ENSMUST00000203706 907 ntBASIC19.39■□□□□ 0.69
Rbm28Q8CGC6 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.39■□□□□ 0.69
Rbm28Q8CGC6 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.39■□□□□ 0.69
Rbm28Q8CGC6 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rbm28Q8CGC6 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rbm28Q8CGC6 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rbm28Q8CGC6 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rbm28Q8CGC6 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rbm28Q8CGC6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rbm28Q8CGC6 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Rbm28Q8CGC6 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rbm28Q8CGC6 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rbm28Q8CGC6 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.39■□□□□ 0.69
Rbm28Q8CGC6 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.39■□□□□ 0.69
Rbm28Q8CGC6 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rbm28Q8CGC6 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Rbm28Q8CGC6 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.38■□□□□ 0.69
Rbm28Q8CGC6 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rbm28Q8CGC6 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rbm28Q8CGC6 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rbm28Q8CGC6 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Rbm28Q8CGC6 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms