Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ShfQ8CG80 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.69□□□□□ -0.06
ShfQ8CG80 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ShfQ8CG80 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ShfQ8CG80 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.68□□□□□ -0.06
ShfQ8CG80 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
ShfQ8CG80 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.68□□□□□ -0.06
ShfQ8CG80 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
ShfQ8CG80 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
ShfQ8CG80 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ShfQ8CG80 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ShfQ8CG80 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.68□□□□□ -0.06
ShfQ8CG80 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.68□□□□□ -0.06
ShfQ8CG80 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.68□□□□□ -0.06
ShfQ8CG80 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ShfQ8CG80 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ShfQ8CG80 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ShfQ8CG80 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ShfQ8CG80 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ShfQ8CG80 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ShfQ8CG80 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ShfQ8CG80 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
ShfQ8CG80 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ShfQ8CG80 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ShfQ8CG80 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ShfQ8CG80 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.68□□□□□ -0.06
ShfQ8CG80 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ShfQ8CG80 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ShfQ8CG80 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ShfQ8CG80 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ShfQ8CG80 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
ShfQ8CG80 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.68□□□□□ -0.06
ShfQ8CG80 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ShfQ8CG80 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ShfQ8CG80 Phf7-203ENSMUST00000226565 1971 ntBASIC14.67□□□□□ -0.06
ShfQ8CG80 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ShfQ8CG80 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
ShfQ8CG80 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ShfQ8CG80 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ShfQ8CG80 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ShfQ8CG80 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ShfQ8CG80 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.67□□□□□ -0.06
ShfQ8CG80 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.67□□□□□ -0.06
ShfQ8CG80 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
ShfQ8CG80 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ShfQ8CG80 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ShfQ8CG80 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ShfQ8CG80 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.67□□□□□ -0.06
ShfQ8CG80 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
ShfQ8CG80 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ShfQ8CG80 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
ShfQ8CG80 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ShfQ8CG80 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ShfQ8CG80 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShfQ8CG80 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShfQ8CG80 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShfQ8CG80 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.66□□□□□ -0.06
ShfQ8CG80 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ShfQ8CG80 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShfQ8CG80 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShfQ8CG80 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShfQ8CG80 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShfQ8CG80 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
ShfQ8CG80 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShfQ8CG80 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ShfQ8CG80 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.66□□□□□ -0.06
ShfQ8CG80 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShfQ8CG80 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.66□□□□□ -0.06
ShfQ8CG80 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShfQ8CG80 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.66□□□□□ -0.06
ShfQ8CG80 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ShfQ8CG80 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.66□□□□□ -0.06
ShfQ8CG80 Gm44450-201ENSMUST00000199528 114 ntBASIC14.66□□□□□ -0.06
ShfQ8CG80 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShfQ8CG80 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ShfQ8CG80 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ShfQ8CG80 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShfQ8CG80 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShfQ8CG80 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ShfQ8CG80 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShfQ8CG80 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShfQ8CG80 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShfQ8CG80 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShfQ8CG80 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShfQ8CG80 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShfQ8CG80 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShfQ8CG80 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ShfQ8CG80 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ShfQ8CG80 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ShfQ8CG80 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ShfQ8CG80 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ShfQ8CG80 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
ShfQ8CG80 Gm11539-201ENSMUST00000119837 557 ntBASIC14.65□□□□□ -0.06
ShfQ8CG80 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.65□□□□□ -0.06
ShfQ8CG80 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ShfQ8CG80 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.65□□□□□ -0.06
ShfQ8CG80 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ShfQ8CG80 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.65□□□□□ -0.06
ShfQ8CG80 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ShfQ8CG80 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms